RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CD300LGQ6UXG3 332 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 DCXRQ7Z4W1 244 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 NLRP8Q86W28 1048 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF511Q8NB15 262 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 UBL7Q96S82 380 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 NPFFR2Q9Y5X5 522 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC5A10A0PJK1 596 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 GPR171O14626 319 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CALCBP10092 127 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CR2P20023 1033 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 TNFSF8P32971 234 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 FOXK2Q01167 660 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 FAM90A27PA6NNH2 459 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 ADAM23O75077 832 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 NPBWR1P48145 328 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CRMP1Q14194 572 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC48A1Q6P1K1 146 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 LGALS14Q8TCE9 139 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 TMEM106AQ96A25 262 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 SEC22AQ96IW7 307 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 SEMA4GQ9NTN9 838 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 MOKQ9UQ07 419 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 TNFSF11O14788 317 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 P2RX6O15547 441 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 PIPP12273 146 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 GFERP55789 205 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 PFN3P60673 137 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 IDO2Q6ZQW0 420 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CCDC71Q8IV32 467 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 BAHD1Q8TBE0 780 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CPNE4Q96A23 557 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 SARAFQ96BY9 339 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 BIN3Q9NQY0 253 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A0B4J2A0 478 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 SHC1P29353 583 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 HOXD12P35452 270 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 PCBP4P57723 403 aaKnown RBP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 PLA2G7Q13093 441 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 TP53I13Q8NBR0 393 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 DVL3Q92997 716 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 SHPKQ9UHJ6 478 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 OSGIN1Q9UJX0 560 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 CHRNB1P11230 501 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 MEP1BQ16820 701 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 TMEM217Q8N7C4 229 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ARSGQ96EG1 525 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A1B0GVG6 124 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 GABRA5P31644 462 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ARL16Q0P5N6 197 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 FZD2Q14332 565 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 NUMA1Q14980 2115 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 S100A7AQ86SG5 101 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF546Q86UE3 836 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 NOXA1Q86UR1 476 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 SAMD10Q9BYL1 202 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 KCNK2O95069 426 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 S100A7P31151 101 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 SMIM15Q7Z3B0 74 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 PLPP7Q8NBV4 271 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ELP4Q96EB1 424 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 LOXL4Q96JB6 756 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 MCM3APO60318 1980 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 IMPA2O14732 288 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ST6GAL1P15907 406 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 TAS2R30P59541 319 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ADPRMQ3LIE5 342 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 PLK5Q496M5 336 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 ABHD17CQ6PCB6 329 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 TMEM207Q6UWW9 146 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC16A11Q8NCK7 471 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 TSLPQ969D9 159 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 DUSP15Q9H1R2 295 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 SERGEFQ9UGK8 458 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 KIF25Q9UIL4 384 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 COA3Q9Y2R0 106 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 HRH3Q9Y5N1 445 aa13.04□□□□□ -0.32
PCDHA11-201ENST00000398640 K7EPK0 472 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 NUPL2O15504 423 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 RAB40ALP0C0E4 278 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 RPS23P62266 143 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 MC2RQ01718 297 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 PRTGQ2VWP7 1150 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 HACD4Q5VWC8 232 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 CPEB2Q7Z5Q1 589 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 FAM71E2Q8N5Q1 922 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 FAM71CQ8NEG0 241 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 LIPHQ8WWY8 451 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 RAB40AQ8WXH6 277 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 TCEAL2Q9H3H9 227 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A1W2PNR3 127 aa13.03□□□□□ -0.32
PCDHA11-201ENST00000398640 GABARAPH6UMI1 98 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms