RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLC6A19Q695T7 634 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 TMEM71Q6P5X7 295 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF511Q8NB15 262 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 ZSCAN1Q8NBB4 408 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 OR1J4Q8NGS1 313 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 FAM3CQ92520 227 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 TSSK2Q96PF2 358 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 UFSP2Q9NUQ7 469 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 TMEM272A0A1B0GTI8 110 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 PHYHO14832 338 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 OR10H2O60403 315 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 PAX6P26367 422 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 GPX4P36969 197 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 TAS2R20P59543 309 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 PSG6Q00889 435 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 PLA2G7Q13093 441 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 CBFBQ13951 182 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 ULK3Q6PHR2 472 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 PARM1Q6UWI2 310 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF813Q6ZN06 617 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 KRT77Q7Z794 578 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 STK35Q8TDR2 534 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 C15orf40Q8WUR7 153 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 FGF14Q92915 247 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 EGLN1Q9GZT9 426 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 SZT2Q5T011 3432 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 CD1AP06126 327 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ABCD3P28288 659 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 PNLIPRP2P54317 469 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 CXADRP78310 365 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 FABP9Q0Z7S8 132 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 KIR2DS3Q14952 304 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ITPRIPL2Q3MIP1 535 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 GLT8D1Q68CQ7 371 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF776Q68DI1 518 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 TMEM184AQ6ZMB5 413 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ARL11Q969Q4 196 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ELSPBP1Q96BH3 223 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 PFDN5Q99471 154 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ZFYVE21Q9BQ24 234 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 RPP25Q9BUL9 199 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 LHX6Q9UPM6 363 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 A0A1B0GTH9 108 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 HRKO00198 91 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 TXNL1O43396 289 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 RDH16O75452 317 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ACTL6AO96019 429 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ADRA2CP18825 462 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 NFYBP25208 207 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 LSSP48449 732 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 LEG1Q6P5S2 330 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 LINC00114Q6XXX2 140 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 STAC2Q6ZMT1 411 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 DPY19L2P2Q6ZN68 376 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 SLC35F3Q8IY50 421 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 CA13Q8N1Q1 262 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 C15orf54Q8N8G6 183 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 PHYHIPQ92561 330 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 GTF3AQ92664 365 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 RNF166Q96A37 237 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 ANKRD9Q96BM1 317 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 HAVCR1Q96D42 359 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 Q96M85 177 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 VRK1Q99986 396 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 KLHDC2Q9Y2U9 406 aa14.49□□□□□ -0.09
CHMP1A-201ENST00000397901 TMEM72A0PK05 275 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 OR6C76A6NM76 312 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 FGF16O43320 207 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 KIR2DL1P43626 348 aaPredicted RBP14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ADPRHP54922 357 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 STARD6P59095 220 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 DEFA6Q01524 100 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ILF3Q12906 894 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 TMPRSS12Q86WS5 348 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF561Q8N587 486 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 TCTEX1D2Q8WW35 142 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 SLC39A7Q92504 469 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 CTHRC1Q96CG8 243 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 LRFN5Q96NI6 719 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ALG12Q9BV10 488 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 TREM1Q9NP99 234 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 POLE3Q9NRF9 147 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 TNFSF18Q9UNG2 199 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 MOKQ9UQ07 419 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 RPH3AQ9Y2J0 694 aaPredicted RBP14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 TICRRQ7Z2Z1 1910 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 K7EQS6 105 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 PLRG1O43660 514 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 MAS1P04201 325 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 RAB40ALP0C0E4 278 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF44P15621 663 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ITPKBP27987 946 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 P2RY4P51582 365 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 GPR18Q14330 331 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 ODF4Q2M2E3 257 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 BEST3Q8N1M1 668 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 SLC43A2Q8N370 569 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 PATE1Q8WXA2 126 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 RAB40AQ8WXH6 277 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms