RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SLC16A14Q7RTX9 510 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 YTHDF3Q7Z739 585 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 MYPOPQ86VE0 399 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 FGFBP3Q8TAT2 258 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 NABP1Q96AH0 204 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 RADILQ96JH8 1075 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 VSX1Q9NZR4 365 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 POU2F3Q9UKI9 436 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 CREBBPQ92793 2442 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 ATP6V1G2-DDX39BF2Z307 99 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 BHLHE40O14503 412 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 RAB36O95755 333 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 FCGR1AP12314 374 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 HIST1H1CP16403 213 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 NPR2P20594 1047 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 PRKACGP22612 351 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 GIPRP48546 466 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 COX10Q12887 443 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 ETFDHQ16134 617 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 SGCAQ16586 387 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 SLC35F1Q5T1Q4 408 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 LEG1Q6P5S2 330 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 C20orf204Q6ZNR8 217 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 DEPDC4Q8N2C3 294 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 LRRC18Q8N456 261 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 OR4K13Q8NH42 304 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 PYDC1Q8WXC3 89 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 RAB3IPQ96QF0 476 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 KCNS3Q9BQ31 491 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 TSSK6Q9BXA6 273 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 RERGLQ9H628 205 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 SIAEQ9HAT2 523 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 MOKQ9UQ07 419 aa18.43■□□□□ 0.54
TSPAN4-206ENST00000397408 IDH3BO43837 385 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 SLC16A7O60669 478 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 ATE1O95260 518 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 TP53P04637 393 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 DNASE1P24855 282 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 RAB1AP62820 205 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 NAAAQ02083 359 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 SLC36A2Q495M3 483 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 FOXL2NBQ6ZUU3 175 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 ZNF611Q8N823 705 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 ATG16L2Q8NAA4 619 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 LRTOMTQ8WZ04 291 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 NINJ1Q92982 152 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 FBXW5Q969U6 566 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 NRBF2Q96F24 287 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 NMNAT3Q96T66 252 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 ZNF556Q9HAH1 456 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 MYO9AB2RTY4 2548 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 DSCAMO60469 2012 aa18.42■□□□□ 0.54
TSPAN4-206ENST00000397408 RENP00797 406 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 CRYAAP02489 173 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 ANXA8P13928 327 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 GUCA1AP43080 201 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 SLC36A3Q495N2 470 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 B3GLCTQ6Y288 498 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 DPPA2Q7Z7J5 298 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 AMIGO2Q86SJ2 522 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 SDR9C7Q8NEX9 313 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 OR52E2Q8NGJ4 325 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 OR4Q3Q8NH05 313 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 OR5K1Q8NHB7 308 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 TEX47Q8TBZ9 253 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 MS4A3Q96HJ5 214 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 ZNF75AQ96N20 296 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 FOXN4Q96NZ1 517 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 BDH2Q9BUT1 245 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 NUAK2Q9H093 628 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 RNF121Q9H920 327 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 CISD1Q9NZ45 108 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 KIF17Q9P2E2 1029 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 REV1Q9UBZ9 1251 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 ATP23Q9Y6H3 246 aa18.41■□□□□ 0.54
TSPAN4-206ENST00000397408 H3BN98 237 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 KHDRBS3O75525 346 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 ZNF14P17017 642 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 CD53P19397 219 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 TMEM53Q6P2H8 277 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 OR2T33Q8NG76 320 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 TSSK2Q96PF2 358 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 SNX18Q96RF0 628 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 CCL19Q99731 98 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 KCNN2Q9H2S1 579 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 POLE4Q9NR33 117 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 E7EQL1 145 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 MGRN1O60291 552 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 MSR1P21757 451 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 LAP3P28838 519 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 CALCRP30988 508 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 RAB39AQ14964 217 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 FAM27BQ5VT28 67 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 DNM1P34Q6PK57 102 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 LNX2Q8N448 690 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 FN3KQ9H479 309 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 CCNB1IP1Q9NPC3 277 aa18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 RPRD1BQ9NQG5 326 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-206ENST00000397408 FBXL3Q9UKT7 428 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms