RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 H2AFY2Q9P0M6 372 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 RAB26Q9ULW5 256 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 CDAP32320 146 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 GUCA1AP43080 201 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 FBXL19-AS1Q494R0 122 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 AADACL4Q5VUY2 407 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 STAC2Q6ZMT1 411 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 USP51Q70EK9 711 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 BHLHA15Q7RTS1 189 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 GLB1L2Q8IW92 636 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 OR1K1Q8NGR3 316 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 RHOXF1Q8NHV9 184 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 ZNRF4Q8WWF5 429 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 KISS1RQ969F8 398 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 TMEM38BQ9NVV0 291 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 DNAJC27Q9NZQ0 273 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 AASSQ9UDR5 926 aa20.73■□□□□ 0.91
TSPAN4-203ENST00000397397 RAD51DO75771 328 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 GPANK1O95872 356 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 B4GALT1P15291 398 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 GABRB1P18505 474 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 LAP3P28838 519 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 RPS7P62081 194 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 APOFQ13790 326 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 SGCAQ16586 387 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 NXNL2Q5VZ03 156 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 ZNF813Q6ZN06 617 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 OR6K6Q8NGW6 343 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 HTRA1Q92743 480 aa20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 RNASE6Q93091 150 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-203ENST00000397397 PRODHO43272 600 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 HLA-DQA2P01906 255 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 SLC2A5P22732 501 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 IL32P24001 234 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 GLO1Q04760 184 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 MAD2L1BPQ15013 274 aaPredicted RBP20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 KLHL24Q6TFL4 600 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 FOXL2NBQ6ZUU3 175 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 GID4Q8IVV7 300 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 ZNF582Q96NG8 517 aaPredicted RBP20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 HDHD5Q9BXW7 423 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 CLN6Q9NWW5 311 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 MOKQ9UQ07 419 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 HSPE1-MOB4S4R3N1 261 aa20.71■□□□□ 0.91
TSPAN4-203ENST00000397397 A0A096LPE4 126 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 A0A1W2PPZ6 126 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 WIPF3A6NGB9 483 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ENTPD6O75354 484 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 GLCEO94923 617 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 RNF224P0DH78 156 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 NPR2P20594 1047 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 PSMB1P20618 241 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ISL1P61371 349 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 MRPS34P82930 218 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 GABRA6Q16445 453 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 OCLNQ16625 522 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC35D3Q5M8T2 416 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC25A30Q5SVS4 291 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 MEDAGQ5VYS4 303 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ANKRD16Q6P6B7 361 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 MEPCEQ7L2J0 689 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 THAP5Q7Z6K1 395 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 C1orf162Q8NEQ5 155 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 BCL2L2Q92843 193 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ANKRD60Q9BZ19 345 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 FLNCQ14315 2725 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 CCDC182A6NF36 153 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 C16orf97H3BN30 126 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 MPZL1O95297 269 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 SCG5P05408 212 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 GAAP10253 952 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 FMO3P31513 532 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 UGT2B10P36537 528 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 CDH11P55287 796 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 HIKESHIQ53FT3 197 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 LINC01590Q5TEZ4 76 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 OR7E24Q6IFN5 339 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ZNF627Q7L945 461 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC22A24Q8N4F4 322 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 CNIH3Q8TBE1 160 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 SSC4DQ8WTU2 575 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 NABP1Q96AH0 204 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 ZMYND19Q96E35 227 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 Q96MT0 163 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 NELFAQ9H3P2 528 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 Q9H521 79 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 POLE4Q9NR33 117 aa20.7■□□□□ 0.9
TSPAN4-203ENST00000397397 TVP23AA6NH52 213 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 FARS2O95363 451 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 OR8G3PP0DMU2 310 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 MSR1P21757 451 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 MYF6P23409 242 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 BLVRAP53004 296 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 HSF2Q03933 536 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 TFF3Q07654 80 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 LCN1P1Q5VSP4 162 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 OTPQ5XKR4 325 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 LYPD4Q6UWN0 246 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 B3GLCTQ6Y288 498 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms