RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLC22A23A1A5C7 686 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 OR14I1A6ND48 311 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 TRMUO75648 421 aaKnown RBP11.72□□□□□ -0.53
SEC13-209ENST00000397117 FADS2O95864 444 aaKnown RBP11.72□□□□□ -0.53
SEC13-209ENST00000397117 CDK1P06493 297 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 SLC2A5P22732 501 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 SLC15A1P46059 708 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 RUNX1T1Q06455 604 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 PMPCAQ10713 525 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 CAMK2DQ13557 499 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 GTF2IRD2BQ6EKJ0 949 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 DNM1P34Q6PK57 102 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 NHLRC1Q6VVB1 395 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 PRSS48Q7RTY5 328 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 GTF2IRD2Q86UP8 949 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 TMEM200AQ86VY9 491 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 OR51L1Q8NGJ5 315 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 FNDC9Q8TBE3 224 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 ABHD3Q8WU67 409 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 LGALS12Q96DT0 336 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 TMEM80Q96HE8 168 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 TSSK2Q96PF2 358 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 RBP7Q96R05 134 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 KCNK17Q96T54 332 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 TUBA1CQ9BQE3 449 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 ALG12Q9BV10 488 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 EMC3Q9P0I2 261 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 KLHL9Q9P2J3 617 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 MOKQ9UQ07 419 aa11.72□□□□□ -0.53
SEC13-209ENST00000397117 FLNAP21333 2647 aaKnown RBP11.72□□□□□ -0.53
SEC13-209ENST00000397117 CCDC182A6NF36 153 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 SLC22A20A6NK97 555 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 GPR171O14626 319 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 SLC16A7O60669 478 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 GLCEO94923 617 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 RAB36O95755 333 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 FCGR2AP12318 317 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 NR2C1P13056 603 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 CRABP1P29762 137 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 GSTT1P30711 240 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 RPL5P46777 297 aaKnown RBP11.71□□□□□ -0.53
SEC13-209ENST00000397117 CENPAP49450 140 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 DBPQ10586 325 aaPredicted RBP11.71□□□□□ -0.53
SEC13-209ENST00000397117 POU4F2Q12837 409 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 RNPS1Q15287 305 aaKnown RBP11.71□□□□□ -0.53
SEC13-209ENST00000397117 CARD17Q5XLA6 110 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 B3GLCTQ6Y288 498 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 OR6V1Q8N148 313 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 NOXO1Q8NFA2 376 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 OR51G2Q8NGK0 314 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 RNF128Q8TEB7 428 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 ZMYND19Q96E35 227 aaPredicted RBP11.71□□□□□ -0.53
SEC13-209ENST00000397117 NUAK2Q9H093 628 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.53
SEC13-209ENST00000397117 ZNF175Q9Y473 711 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 FLVCR1Q9Y5Y0 555 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 FKBP7Q9Y680 259 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 COMMD3-BMI1R4GMX3 469 aa11.71□□□□□ -0.53
SEC13-209ENST00000397117 ZNF716A6NP11 495 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 FAM171A2A8MVW0 826 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 APOL3O95236 402 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 MT-ND2P03891 347 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 HTR1AP08908 422 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 PGA4P0DJD7 388 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 PGA3P0DJD8 388 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 MYL12AP19105 171 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 DCKP27707 260 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 C21orf33P30042 268 aaPredicted RBP11.71□□□□□ -0.54
SEC13-209ENST00000397117 PYCR1P32322 319 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 NR1H2P55055 460 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 THEM4Q5T1C6 240 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 P4HA3Q7Z4N8 544 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 SPARTQ8N0X7 666 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 OR52I1Q8NGK6 324 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 OR5M9Q8NGP3 310 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 FNDC8Q8TC99 324 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 NINJ1Q92982 152 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 KISS1RQ969F8 398 aaPredicted RBP11.71□□□□□ -0.54
SEC13-209ENST00000397117 ZNF775Q96BV0 537 aaPredicted RBP11.71□□□□□ -0.54
SEC13-209ENST00000397117 ZNF385AQ96PM9 386 aaKnown RBP11.71□□□□□ -0.54
SEC13-209ENST00000397117 MRPL13Q9BYD1 178 aaKnown RBP11.71□□□□□ -0.54
SEC13-209ENST00000397117 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.54
SEC13-209ENST00000397117 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 B9D1Q9UPM9 204 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 PCDHGB1Q9Y5G3 927 aa11.71□□□□□ -0.54
SEC13-209ENST00000397117 ARHGAP21Q5T5U3 1957 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 CENPBD1B2RD01 187 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 DCTN6O00399 190 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 AQP8O94778 261 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 HLA-DQA2P01906 255 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 MRPL3P09001 348 aaKnown RBP11.7□□□□□ -0.54
SEC13-209ENST00000397117 CTLA4P16410 223 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 ALDH3B2P48448 385 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 BLVRAP53004 296 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 SF3B4Q15427 424 aaKnown RBP eCLIP11.7□□□□□ -0.546e-8■■■■□ 20.7
SEC13-209ENST00000397117 PLXDC2Q6UX71 529 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms