RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 MYPOPQ86VE0 399 aaPredicted RBP9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 C1orf174Q8IYL3 243 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 CCDC197Q8NCU1 140 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 OR4K5Q8NGD3 323 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 OR51A7Q8NH64 312 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 ZNF519Q8TB69 540 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 HDAC2Q92769 488 aaKnown RBP9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 MCUR1Q96AQ8 359 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 GPX7Q96SL4 187 aaPredicted RBP9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 DOK1Q99704 481 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 C1orf21Q9H246 121 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 LRMDAQ9H2I8 198 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 GSX1Q9H4S2 264 aaPredicted RBP9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 SEC61A2Q9H9S3 476 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 ZNF346Q9UL40 294 aaKnown RBP9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 CMAHPQ9Y471 501 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 UGT2A1Q9Y4X1 527 aa9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
NDUFA9-202ENST00000396655 TRAV27A0A087WT01 109 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SH3PXD2BA1X283 911 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 CDC42EP2O14613 210 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SSX4O60224 188 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 KRT36O76013 467 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 NDUFB2O95178 105 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 LY6G6DO95868 133 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 ERCC1P07992 297 aaPredicted RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 MMP7P09237 267 aaPredicted RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 APEHP13798 732 aaKnown RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SLC25A16P16260 332 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 HOXB6P17509 224 aaKnown RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 TCN1P20061 433 aaPredicted RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 PCSK6P29122 969 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 IFNGR2P38484 337 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 OMPP47874 163 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 PCBD1P61457 104 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 MXRA7P84157 204 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 GALK2Q01415 458 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 CD47Q08722 323 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 UNQ6126/PRO20091Q6UXV3 157 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 FOXL2NBQ6ZUU3 175 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 ZNF584Q8IVC4 421 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 LINC00471Q8N535 108 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 FAM86B1Q8N7N1 296 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 ZNF540Q8NDQ6 660 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 NEU4Q8WWR8 484 aaPredicted RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SH3GL3Q99963 347 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 RAB1BQ9H0U4 201 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 NRIP3Q9NQ35 241 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 GRHPRQ9UBQ7 328 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SLC7A8Q9UHI5 535 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 ADAM21Q9UKJ8 722 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SIGLEC7Q9Y286 467 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 FKBP7Q9Y680 259 aa9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
NDUFA9-202ENST00000396655 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 IQCMA0A1B0GVH7 501 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 TMEM129A0AVI4 362 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 XKRYO14609 159 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 GADD45GO95257 159 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 TXNDC12O95881 172 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 FABP3P05413 133 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 CST2P09228 141 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 RPL4P36578 427 aaKnown RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 RAD52P43351 418 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 GPR4P46093 362 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 LOXL1Q08397 574 aaPredicted RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 SNTB2Q13425 540 aaKnown RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 TRIM25Q14258 630 aaKnown RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 RAB39AQ14964 217 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 FGD3Q5JSP0 725 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 DPY19L2P2Q6ZN68 376 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 FAM122BQ7Z309 247 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 ADCK1Q86TW2 530 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 ALDH16A1Q8IZ83 802 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 RBM15BQ8NDT2 890 aaKnown RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 SLC30A7Q8NEW0 376 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 OR13C2Q8NGS9 318 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 FGFBP3Q8TAT2 258 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 FAM168AQ92567 244 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 MRPL24Q96A35 216 aaKnown RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 NABP1Q96AH0 204 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 TSPAN32Q96QS1 320 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 SMR3AQ99954 134 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 BCL2L14Q9BZR8 327 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 MS4A5Q9H3V2 200 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 MAGIXQ9H6Y5 334 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 RNF121Q9H920 327 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 PRPF19Q9UMS4 504 aaKnown RBP9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 AURKCQ9UQB9 309 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 TIMM10BQ9Y5J6 103 aa9.57□□□□□ -0.88
NDUFA9-202ENST00000396655 LOC390937A0A1W2PQ73 354 aa9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 PRSS37A4D1T9 235 aa9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 hCG_2039718K7EN88 272 aa9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 IMPA2O14732 288 aa9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 ARPC3O15145 178 aa9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 SYNGR3O43761 229 aa9.56□□□□□ -0.88
NDUFA9-202ENST00000396655 TLX2O43763 284 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms