RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NCS1P62166 190 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 MEP1BQ16820 701 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-204ENST00000396548 GLB1L2Q8IW92 636 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 NDNFQ8TB73 568 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 RBP7Q96R05 134 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 CENPOQ9BU64 300 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 KCNG2Q9UJ96 466 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF670-ZNF695F2Z2N8 137 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 AQP7O14520 342 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 SLC22A1O15245 554 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 AIREO43918 545 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 UPK3AO75631 287 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 CD1AP06126 327 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 GABRA5P31644 462 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RPS27P42677 84 aaKnown RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ID4P47928 161 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ENTPD1P49961 510 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RPS25P62851 125 aaKnown RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 EGR3Q06889 387 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 TP53I3Q53FA7 332 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 OTPQ5XKR4 325 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 DMKNQ6E0U4 476 aaPredicted RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 PLXDC2Q6UX71 529 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 DPY19L4Q7Z388 723 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ABHD3Q8WU67 409 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 PGLYRP3Q96LB9 341 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 J3QLW9 94 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 QDPRP09417 244 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF19P17023 458 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 LAP3P28838 519 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 UGT2B10P36537 528 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ROM1Q03395 351 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 SRYQ05066 204 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 C3AR1Q16581 482 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ZFP41Q8N8Y5 198 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ST7LQ8TDW4 575 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 UFD1Q92890 307 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 DACH2Q96NX9 599 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 DCLRE1CQ96SD1 692 aaKnown RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RERGLQ9H628 205 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 STUB1Q9UNE7 303 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RAXQ9Y2V3 346 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 SPTBN4Q9H254 2564 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF726A6NNF4 738 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 TFECO14948 347 aaPredicted RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RRP8O43159 456 aaKnown RBP11.26□□□□□ -0.61
TRIM39-204ENST00000396548 WNT11O96014 354 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 RASGEF1BQ0VAM2 473 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 CARD17Q5XLA6 110 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 GDPGP1Q6ZNW5 385 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 OR6N2Q8NGY6 317 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 TTTY10Q9BZA0 68 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 BCO1Q9HAY6 547 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 ACOXLQ9NUZ1 547 aa11.26□□□□□ -0.61
TRIM39-204ENST00000396548 A0A087WV48 116 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 SULT1C4O75897 302 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 CD53P19397 219 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 RPTNQ6XPR3 784 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 LINGO2Q7L985 606 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 KCTD20Q7Z5Y7 419 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 C11orf40Q8WZ69 217 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 NSMAFQ92636 917 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 CYB5R1Q9UHQ9 305 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 TMEM14AQ9Y6G1 99 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 CNTRLQ7Z7A1 2325 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 PHYHO14832 338 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 SRSF10O75494 262 aaKnown RBP11.25□□□□□ -0.61
TRIM39-204ENST00000396548 SC5DO75845 299 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 TGM4P49221 684 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 TMPRSS3P57727 454 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 RPS3AP61247 264 aaKnown RBP11.25□□□□□ -0.61
TRIM39-204ENST00000396548 LSM3P62310 102 aaKnown RBP11.25□□□□□ -0.61
TRIM39-204ENST00000396548 ADAM8P78325 824 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 FABP5Q01469 135 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 INAQ16352 499 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 PLEKHN1Q494U1 663 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-204ENST00000396548 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 LDAHQ9H6V9 325 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 TRIM36Q9NQ86 728 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 LAMP5Q9UJQ1 280 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 GRIP1Q9Y3R0 1128 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF407Q9C0G0 2248 aa11.25□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF724A8MTY0 619 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 GALP22466 123 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 TMEM91Q6ZNR0 172 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 ASB17Q8WXJ9 295 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 SLCO1C1Q9NYB5 712 aa11.24□□□□□ -0.61
TRIM39-204ENST00000396548 METTL15A6NJ78 407 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms