RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ABHD6Q9BV23 337 aa15.08■□□□□ 0
NUP50-202ENST00000396096 KLHL9Q9P2J3 617 aa15.08■□□□□ 0
NUP50-202ENST00000396096 MYOTQ9UBF9 498 aa15.08■□□□□ 0
NUP50-202ENST00000396096 NAP1L6A6NFF2 107 aa15.07■□□□□ 0
NUP50-202ENST00000396096 ANXA2P2A6NMY6 339 aa15.07■□□□□ 0
NUP50-202ENST00000396096 ANXA2P07355 339 aaKnown RBP15.07■□□□□ 0
NUP50-202ENST00000396096 FBXO45P0C2W1 286 aa15.07■□□□□ 0
NUP50-202ENST00000396096 FAPQ12884 760 aa15.07■□□□□ 0
NUP50-202ENST00000396096 TNK1Q13470 666 aa15.07■□□□□ 0
NUP50-202ENST00000396096 OR7A5Q15622 319 aa15.07■□□□□ 0
NUP50-202ENST00000396096 PEAR1Q5VY43 1037 aaPredicted RBP15.07■□□□□ 0
NUP50-202ENST00000396096 LCN10Q6JVE6 187 aa15.07■□□□□ 0
NUP50-202ENST00000396096 DNM1P46Q6ZS02 220 aa15.07■□□□□ 0
NUP50-202ENST00000396096 TMPRSS12Q86WS5 348 aa15.07■□□□□ 0
NUP50-202ENST00000396096 ZNF227Q86WZ6 799 aa15.07■□□□□ 0
NUP50-202ENST00000396096 ZFAND1Q8TCF1 268 aa15.07■□□□□ 0
NUP50-202ENST00000396096 MRGPRX4Q96LA9 322 aa15.07■□□□□ 0
NUP50-202ENST00000396096 KCNK17Q96T54 332 aa15.07■□□□□ 0
NUP50-202ENST00000396096 GTPBP2Q9BX10 602 aaKnown RBP15.07■□□□□ 0
NUP50-202ENST00000396096 ACTR6Q9GZN1 396 aa15.07■□□□□ 0
NUP50-202ENST00000396096 SLA2Q9H6Q3 261 aa15.07■□□□□ 0
NUP50-202ENST00000396096 PRMT8Q9NR22 394 aaPredicted RBP15.07■□□□□ 0
NUP50-202ENST00000396096 SDHAF3Q9NRP4 125 aa15.07■□□□□ 0
NUP50-202ENST00000396096 ALKBH4Q9NXW9 302 aa15.07■□□□□ 0
NUP50-202ENST00000396096 STEAP1Q9UHE8 339 aa15.07■□□□□ 0
NUP50-202ENST00000396096 COA3Q9Y2R0 106 aaPredicted RBP15.07■□□□□ 0
NUP50-202ENST00000396096 ALPK2Q86TB3 2170 aa15.06■□□□□ 0
NUP50-202ENST00000396096 TRAV6A0A075B6T7 132 aa15.06■□□□□ 0
NUP50-202ENST00000396096 LIPT2A6NK58 231 aa15.06■□□□□ 0
NUP50-202ENST00000396096 NPIPA5E9PKD4 350 aa15.06■□□□□ 0
NUP50-202ENST00000396096 SRSF10O75494 262 aaKnown RBP15.06■□□□□ 0
NUP50-202ENST00000396096 KRT33AO76009 404 aa15.06■□□□□ 0
NUP50-202ENST00000396096 DKK1O94907 266 aa15.06■□□□□ 0
NUP50-202ENST00000396096 PNPP00491 289 aa15.06■□□□□ 0
NUP50-202ENST00000396096 CCKBRP32239 447 aa15.06■□□□□ 0
NUP50-202ENST00000396096 RIDAP52758 137 aaKnown RBP15.06■□□□□ 0
NUP50-202ENST00000396096 AP3S2P59780 193 aa15.06■□□□□ 0
NUP50-202ENST00000396096 EIF2B1Q14232 305 aaKnown RBP15.06■□□□□ 0
NUP50-202ENST00000396096 UTS2BQ765I0 119 aa15.06■□□□□ 0
NUP50-202ENST00000396096 KRT77Q7Z794 578 aa15.06■□□□□ 0
NUP50-202ENST00000396096 CATSPERDQ86XM0 798 aa15.06■□□□□ 0
NUP50-202ENST00000396096 SLC26A10Q8NG04 563 aa15.06■□□□□ 0
NUP50-202ENST00000396096 OR52N5Q8NH56 324 aa15.06■□□□□ 0
NUP50-202ENST00000396096 OR52I2Q8NH67 350 aa15.06■□□□□ 0
NUP50-202ENST00000396096 FOXN4Q96NZ1 517 aa15.06■□□□□ 0
NUP50-202ENST00000396096 TMEM246Q9BRR3 403 aa15.06■□□□□ 0
NUP50-202ENST00000396096 WDR54Q9H977 334 aa15.06■□□□□ 0
NUP50-202ENST00000396096 APMAPQ9HDC9 416 aa15.06■□□□□ 0
NUP50-202ENST00000396096 FSCN3Q9NQT6 498 aa15.06■□□□□ 0
NUP50-202ENST00000396096 KLRF1Q9NZS2 232 aa15.06■□□□□ 0
NUP50-202ENST00000396096 PPP4R1LQ9P1A2 415 aa15.06■□□□□ 0
NUP50-202ENST00000396096 NPIPA1Q9UND3 350 aa15.06■□□□□ 0
NUP50-202ENST00000396096 B3GALT5Q9Y2C3 310 aa15.06■□□□□ 0
NUP50-202ENST00000396096 HRH3Q9Y5N1 445 aa15.06■□□□□ 0
NUP50-202ENST00000396096 A0A1W2PNV4 684 aa15.06■□□□□ 0
NUP50-202ENST00000396096 MT-ND4P03905 459 aa15.06■□□□□ 0
NUP50-202ENST00000396096 IFNGR1P15260 489 aa15.06■□□□□ 0
NUP50-202ENST00000396096 HSF1Q00613 529 aa15.06■□□□□ 0
NUP50-202ENST00000396096 PLPPR5Q32ZL2 321 aa15.06■□□□□ 0
NUP50-202ENST00000396096 TMEM69Q5SWH9 247 aa15.06■□□□□ 0
NUP50-202ENST00000396096 BMPERQ8N8U9 685 aa15.06■□□□□ 0
NUP50-202ENST00000396096 DNAAF1Q8NEP3 725 aa15.06■□□□□ 0
NUP50-202ENST00000396096 SLC22A8Q8TCC7 542 aa15.06■□□□□ 0
NUP50-202ENST00000396096 FCAMRQ8WWV6 532 aa15.06■□□□□ 0
NUP50-202ENST00000396096 EDAQ92838 391 aa15.06■□□□□ 0
NUP50-202ENST00000396096 ULBP3Q9BZM4 244 aa15.06■□□□□ 0
NUP50-202ENST00000396096 MED28Q9H204 178 aa15.06■□□□□ 0
NUP50-202ENST00000396096 KLHL13Q9P2N7 655 aa15.06■□□□□ 0
NUP50-202ENST00000396096 VDAC3Q9Y277 283 aa15.06■□□□□ 0
NUP50-202ENST00000396096 WIF1Q9Y5W5 379 aa15.06■□□□□ 0
NUP50-202ENST00000396096 MEN1O00255 615 aa15.05■□□□□ -0
NUP50-202ENST00000396096 AQP8O94778 261 aa15.05■□□□□ -0
NUP50-202ENST00000396096 MAS1P04201 325 aa15.05■□□□□ -0
NUP50-202ENST00000396096 H2AFB2P0C5Z0 115 aa15.05■□□□□ -0
NUP50-202ENST00000396096 CDK2P24941 298 aa15.05■□□□□ -0
NUP50-202ENST00000396096 CCR6P51684 374 aa15.05■□□□□ -0
NUP50-202ENST00000396096 ZNF41P51814 821 aaPredicted RBP15.05■□□□□ -0
NUP50-202ENST00000396096 TLE3Q04726 772 aa15.05■□□□□ -0
NUP50-202ENST00000396096 IL11RAQ14626 422 aa15.05■□□□□ -0
NUP50-202ENST00000396096 ELFN2Q5R3F8 820 aa15.05■□□□□ -0
NUP50-202ENST00000396096 CD276Q5ZPR3 534 aa15.05■□□□□ -0
NUP50-202ENST00000396096 PLCZ1Q86YW0 608 aa15.05■□□□□ -0
NUP50-202ENST00000396096 KDM8Q8N371 416 aa15.05■□□□□ -0
NUP50-202ENST00000396096 ADPRHL1Q8NDY3 354 aa15.05■□□□□ -0
NUP50-202ENST00000396096 OR56B4Q8NH76 319 aa15.05■□□□□ -0
NUP50-202ENST00000396096 POC1BQ8TC44 478 aa15.05■□□□□ -0
NUP50-202ENST00000396096 IFI44Q8TCB0 444 aa15.05■□□□□ -0
NUP50-202ENST00000396096 TSEN15Q8WW01 171 aaKnown RBP15.05■□□□□ -0
NUP50-202ENST00000396096 PIGKQ92643 395 aa15.05■□□□□ -0
NUP50-202ENST00000396096 GAREM1Q9H706 876 aa15.05■□□□□ -0
NUP50-202ENST00000396096 HRASLSQ9HDD0 168 aa15.05■□□□□ -0
NUP50-202ENST00000396096 PLSCR3Q9NRY6 295 aa15.05■□□□□ -0
NUP50-202ENST00000396096 OCIAD1Q9NX40 245 aa15.05■□□□□ -0
NUP50-202ENST00000396096 EMC3Q9P0I2 261 aa15.05■□□□□ -0
NUP50-202ENST00000396096 SLC22A13Q9Y226 551 aa15.05■□□□□ -0
NUP50-202ENST00000396096 BOLA1Q9Y3E2 137 aa15.05■□□□□ -0
NUP50-202ENST00000396096 LRP12Q9Y561 859 aa15.05■□□□□ -0
NUP50-202ENST00000396096 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.04■□□□□ -0
NUP50-202ENST00000396096 ACOT7O00154 380 aa15.04■□□□□ -0
NUP50-202ENST00000396096 EFNA2O43921 213 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms