RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 FGGYQ96C11 551 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 MS4A6EQ96DS6 147 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LINC00615Q96LM1 132 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 P2RY12Q9H244 342 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 COPS3Q9UNS2 423 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 MARF1Q9Y4F3 1742 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CXorf51AA0A1B0GTR3 108 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF705FA8MVS1 300 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DOK2O60496 412 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF705DP0CH99 300 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF705BP0CI00 300 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CD1CP29017 333 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 IL10RAQ13651 578 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 XKR7Q5GH72 579 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 NRARPQ7Z6K4 114 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CMTM2Q8TAZ6 248 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 IFI44Q8TCB0 444 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CPNE4Q96A23 557 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PHF7Q9BWX1 381 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 POFUT1Q9H488 388 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TUBG2Q9NRH3 451 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 YARS2Q9Y2Z4 477 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PCDHGA5Q9Y5G8 931 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 MYOFQ9NZM1 2061 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SNRPBP14678 240 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CNR1P21554 472 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 HABP2Q14520 560 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 BEX5Q5H9J7 111 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DOK3Q7L591 496 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TDHQ8IZJ6 230 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LILRA2Q8N149 483 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SLC16A11Q8NCK7 471 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 UBQLN3Q9H347 655 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 EXOSC3Q9NQT5 275 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LAMP3Q9UQV4 416 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CCDC163A0A0D9SF12 145 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CTDSP2O14595 271 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TCRBP04435 133 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SHC1P29353 583 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 HOXC8P31273 242 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PSMB3P49720 205 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 C9orf135Q5VTT2 229 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LHFPL2Q6ZUX7 228 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PLPP5Q8NEB5 264 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LFNGQ8NES3 379 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 KCNE4Q8WWG9 221 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 NIPSNAP1Q9BPW8 284 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 MED16Q9Y2X0 877 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 A3GALT2U3KPV4 340 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 AGAP14A8MT82 685 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SGCEO43556 437 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 HLA-DOBP13765 273 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 RBP2P50120 134 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ACVR1Q04771 509 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ADPRMQ3LIE5 342 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF836Q6ZNA1 936 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SYT13Q7L8C5 426 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DPPA2Q7Z7J5 298 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 KMT5CQ86Y97 462 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 UBALD2Q8IYN6 164 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 MORN4Q8NDC4 146 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 HSD17B8Q92506 261 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SMIM3Q9BZL3 60 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DUSP13Q9UII6 198 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ICE1Q9Y2F5 2266 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TCRBV5S1A1TA0A578 114 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM129A0AVI4 362 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PRRG2O14669 202 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 S100A11P31949 105 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 GPR3P46089 330 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 HSF1Q00613 529 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 POU4F3Q15319 338 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 NHSL2Q5HYW2 709 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 LINC00696Q6ZRV3 163 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ZFP82Q8N141 532 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 NANOGP1Q8N7R0 232 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM102Q8N9M5 508 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 KCNJ15Q99712 375 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ARRDC5A6NEK1 342 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 JTBO76095 146 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 IGLV3-27P01718 113 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ATP1B1P05026 303 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ADH4P08319 380 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 BMP1P13497 986 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DUSP1P28562 367 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SELENBP1Q13228 472 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 DUSP5Q16690 384 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 MARCH3Q86UD3 253 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM200AQ86VY9 491 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 FUNDC1Q8IVP5 155 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 OLIG1Q8TAK6 271 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 FAM213BQ8TBF2 198 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TEAD3Q99594 435 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 C1QTNF3Q9BXJ4 246 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 EMC7Q9NPA0 242 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 APOA2P02652 100 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TFAP2AP05549 437 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 HMGA1P17096 107 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 C6orf15Q6UXA7 325 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms