RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 DLX5P56178 289 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 RAB25P57735 213 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 DGCR2P98153 550 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 GLO1Q04760 184 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 PLA2G7Q13093 441 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 CAMK2DQ13557 499 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 CLPPQ16740 277 aaPredicted RBP13.48□□□□□ -0.25
GPC3-202ENST00000394299 SLC25A53Q5H9E4 307 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
GPC3-202ENST00000394299 SLC18B1Q6NT16 456 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 DBX2Q6ZNG2 339 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 KRT77Q7Z794 578 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 ZNF679Q8IYX0 411 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 TMEM106AQ96A25 262 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 POTEKPQ9BYX7 375 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 TCF7L1Q9HCS4 588 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 TRBV5-5A0A0J9YX44 114 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 CCNKO75909 580 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 FAM157BP0CG42 384 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 PTHLHP12272 177 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 TCN2P20062 427 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 PTBP1P26599 531 aaKnown RBP eCLIP13.47□□□□□ -0.253e-7■■■□□ 15.8
GPC3-202ENST00000394299 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 FOLR3P41439 243 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 RPS15P62841 145 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 MFAP5Q13361 173 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 CARD17Q5XLA6 110 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 NHLRC1Q6VVB1 395 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 KRT74Q7RTS7 529 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 SLC26A10Q8NG04 563 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 TRIM63Q969Q1 353 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 LIN7BQ9HAP6 207 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 RBFOX1Q9NWB1 397 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 ABRACLQ9P1F3 81 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 PISDQ9UG56 409 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 SPATA2Q9UM82 520 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 V9GY05 133 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 EIF1AYO14602 144 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 CRABP1P29762 137 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 DDOSTP39656 456 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 EIF1AXP47813 144 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 P2RY4P51582 365 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 Q0VFX4 171 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 GPR176Q14439 515 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 SF3A2Q15428 464 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 DCAF12Q5T6F0 453 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 RSBN1Q5VWQ0 802 aaPredicted RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 DCXRQ7Z4W1 244 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 LRRTM1Q86UE6 522 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 RPS19BP1Q86WX3 136 aaKnown RBP13.47□□□□□ -0.25
GPC3-202ENST00000394299 FADS6Q8N9I5 356 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 OR6S1Q8NH40 331 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 SNX18Q96RF0 628 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 RNF121Q9H920 327 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 ALKBH4Q9NXW9 302 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 TEKT2Q9UIF3 430 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
GPC3-202ENST00000394299 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 FAM240BA0A1B0GVZ2 78 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 TP53I11O14683 189 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 F10P00742 488 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 GP1BAP07359 652 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 PRKAR1AP10644 381 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 DPP4P27487 766 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 PTGS2P35354 604 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 NR4A2P43354 598 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 MFSD13AQ14CX5 517 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 C3orf33Q6P1S2 294 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 TMEM156Q8N614 296 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 RFT1Q96AA3 541 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 UPRTQ96BW1 309 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 MNTQ99583 582 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 BEX2Q9BXY8 128 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 COMMD4Q9H0A8 199 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 NUFIP1Q9UHK0 495 aaKnown RBP13.46□□□□□ -0.25
GPC3-202ENST00000394299 PADI1Q9ULC6 663 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 B3GALT5Q9Y2C3 310 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 A0A1W2PNU3 283 aaPredicted RBP13.46□□□□□ -0.25
GPC3-202ENST00000394299 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
GPC3-202ENST00000394299 EXT1Q16394 746 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 ASPHD2Q6ICH7 369 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 NDUFAF7Q7L592 441 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 PLCZ1Q86YW0 608 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 M1APQ8TC57 530 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 RNF128Q8TEB7 428 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 UBASH3BQ8TF42 649 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 SLC25A38Q96DW6 304 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 CENPMQ9NSP4 180 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 OR5V1Q9UGF6 321 aa13.46□□□□□ -0.25
GPC3-202ENST00000394299 ASPMQ8IZT6 3477 aa13.46□□□□□ -0.26
GPC3-202ENST00000394299 AIPO00170 330 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 ZNF823P16415 610 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 CDAP32320 146 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 SSR4P51571 173 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TMEM225Q6GV28 225 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 PYHIN1Q6K0P9 492 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 LRFN4Q6PJG9 635 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms