RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 KCNJ15Q99712 375 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 HEYLQ9NQ87 328 aaPredicted RBP10.92□□□□□ -0.66
SYNPO-202ENST00000394243 A0A0B4J203 849 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 FOXE1O00358 373 aaPredicted RBP10.92□□□□□ -0.66
SYNPO-202ENST00000394243 SUSD5O60279 629 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 FPR3P25089 353 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 PAX6P26367 422 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 FABP5Q01469 135 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 GGNBP1Q5YKI7 109 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 OR8D4Q8NGM9 314 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 SLC17A9Q9BYT1 436 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ENKD1Q9H0I2 346 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 PRSS16Q9NQE7 514 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 MAN2B1O00754 1011 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 HTR5AP47898 357 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 GGTA1PQ4G0N0 100 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 DHRS4L2Q6PKH6 230 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 RASD2Q96D21 266 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 GNPNAT1Q96EK6 184 aaPredicted RBP10.92□□□□□ -0.66
SYNPO-202ENST00000394243 C1QTNF3Q9BXJ4 246 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 CHEK1O14757 476 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 BCL2L11O43521 198 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 SSSCA1O60232 199 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 CNMDO75829 334 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ADRA1AP35348 466 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 CTSCP53634 463 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 NCR3LG1Q68D85 454 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 UQCC3Q6UW78 93 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF852Q6ZMS4 543 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 DPY19L2P2Q6ZN68 376 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ADIPOR2Q86V24 386 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 OR52E1Q8NGJ3 308 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 CA5BP1Q8WTZ4 195 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 NUDT8Q8WV74 236 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 DUS3LQ96G46 650 aaKnown RBP10.92□□□□□ -0.66
SYNPO-202ENST00000394243 LYSMD1Q96S90 227 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ARHGDIGQ99819 225 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ULBP2Q9BZM5 246 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 DUSP21Q9H596 190 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF385DQ9H6B1 395 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 OBP2BQ9NPH6 170 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 INSL6Q9Y581 213 aa10.92□□□□□ -0.66
SYNPO-202ENST00000394243 SPP1P10451 314 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
SYNPO-202ENST00000394243 CLDN2P57739 230 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 DLEU7Q6UYE1 221 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 SHISA6Q6ZSJ9 500 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 CMTM4Q8IZR5 234 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 KIAA1958Q8N8K9 716 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 ARRDC2Q8TBH0 407 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 PPP1R1CQ8WVI7 109 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 KCNG2Q9UJ96 466 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 C5AR1P21730 350 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 TGM1P22735 817 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 SLC6A11P48066 632 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 ERV3-1Q14264 604 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 C1QTNF12Q5T7M4 302 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 OR4N2Q8NGD1 307 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 POMT2Q9UKY4 750 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 HOXA11P31270 313 aaPredicted RBP10.91□□□□□ -0.66
SYNPO-202ENST00000394243 OTX2P32243 289 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
SYNPO-202ENST00000394243 KDF1Q8NAX2 398 aaPredicted RBP10.91□□□□□ -0.66
SYNPO-202ENST00000394243 CMBLQ96DG6 245 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 IGSF21Q96ID5 467 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 UCK1Q9HA47 277 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 TGM5O43548 720 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 MFSD4AQ8N468 514 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 TTC9BQ8N6N2 239 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 GAS2L1Q99501 681 aaPredicted RBP10.91□□□□□ -0.66
SYNPO-202ENST00000394243 ACOXLQ9NUZ1 547 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 PADI1Q9ULC6 663 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 TCAPO15273 167 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 OLIG3Q7RTU3 272 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 SCD5Q86SK9 330 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 PFN4Q8NHR9 129 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 SEH1LQ96EE3 360 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 NEURL3Q96EH8 262 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 TMEM38AQ9H6F2 299 aa10.91□□□□□ -0.66
SYNPO-202ENST00000394243 H3BQ06 376 aaPredicted RBP10.9□□□□□ -0.66
SYNPO-202ENST00000394243 ZNF264O43296 627 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CATSPERDQ86XM0 798 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 OR1J1Q8NGS3 322 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 FOXJ1Q92949 421 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 AUNIPQ9H7T9 357 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CLDND1Q9NY35 253 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 Q9Y3F1 56 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 HRO43593 1189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A6P0DMU7 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A5P0DMU8 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A7P0DMV0 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A8P0DMV1 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A9P0DMV2 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 SUOXP51687 545 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A2Q5DJT8 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 CT45A1Q5HYN5 189 aa10.9□□□□□ -0.66
SYNPO-202ENST00000394243 RBM45Q8IUH3 476 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms