RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 RBBP9O75884 186 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 AKR7A3O95154 331 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 RCBTB2O95199 551 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 RLN1P04808 185 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SLC25A4P12235 298 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 PTHLHP12272 177 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 PRF1P14222 555 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 CSNK2A2P19784 350 aaPredicted RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 NDUFS1P28331 727 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 BCL6P41182 706 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ARRB1P49407 418 aaPredicted RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 P2RY4P51582 365 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 HCCSP53701 268 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SLC16A1P53985 500 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 GFERP55789 205 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TAS2R20P59543 309 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 BLOC1S1P78537 153 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 PDZK1IP1Q13113 114 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 CEBPEQ15744 281 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 FAM76BQ5HYJ3 339 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 LY6G6FQ5SQ64 297 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 MRM1Q6IN84 353 aaKnown RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 H3F3CQ6NXT2 135 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 USP53Q70EK8 1073 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 GLB1L2Q8IW92 636 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 OR4C16Q8NGL9 310 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TLNRD1Q9H1K6 362 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 C1orf198Q9H425 327 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TMEM185BQ9H7F4 350 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 MTHFD2LQ9H903 347 aaPredicted RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 MRPS30Q9NP92 439 aaKnown RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 NOX4Q9NPH5 578 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TMEM138Q9NPI0 162 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 OR5V1Q9UGF6 321 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 NTNG1Q9Y2I2 539 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 KCNE3Q9Y6H6 103 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 V9GY05 133 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 MDC1Q14676 2089 aaKnown RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 LNP1A1A4G5 178 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 LRIT2A6NDA9 550 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ACOD1A6NK06 481 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 C2orf74A8MZ97 194 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 GPRIN2O60269 458 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 RDH16O75452 317 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 MELTFP08582 738 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 OR1D5P58170 312 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 RAB5BP61020 215 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ACTA2P62736 377 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ACTG2P63267 376 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TCF15Q12870 199 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 C14orf28Q4W4Y0 310 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TP53I3Q53FA7 332 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 FCRL6Q6DN72 434 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SLC23A3Q6PIS1 610 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SMAD5Q99717 465 aaKnown RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 TCEAL7Q9BRU2 100 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ACTRT3Q9BYD9 372 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 EGLN1Q9GZT9 426 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 LRIT1Q9P2V4 623 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 SUSD2Q9UGT4 822 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ZNF223Q9UK11 482 aaPredicted RBP10.1□□□□□ -0.79
CUX1-204ENST00000393824 OR10H1Q9Y4A9 318 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 ETV7Q9Y603 341 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 LAMA5O15230 3695 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 TRBV2A0A0J9YWF9 115 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 PRR33A8MZF0 331 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 GLSO94925 669 aaPredicted RBP10.09□□□□□ -0.79
CUX1-204ENST00000393824 ABOP16442 354 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 PAX6P26367 422 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 MPIP34949 423 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 ADH7P40394 386 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 TSPAN7P41732 249 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 TSFMP43897 325 aaKnown RBP10.09□□□□□ -0.79
CUX1-204ENST00000393824 RPS15P62841 145 aaKnown RBP10.09□□□□□ -0.79
CUX1-204ENST00000393824 HABP2Q14520 560 aaPredicted RBP10.09□□□□□ -0.79
CUX1-204ENST00000393824 EIPR1Q53HC9 387 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 GLT8D1Q68CQ7 371 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 RHOUQ7L0Q8 258 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.09□□□□□ -0.79
CUX1-204ENST00000393824 MISPQ8IVT2 679 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 SLC43A2Q8N370 569 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 RAB42Q8N4Z0 105 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 NUP43Q8NFH3 380 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 C16orf58Q96GQ5 468 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 PEX11GQ96HA9 241 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 ZNF75AQ96N20 296 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 RAB11FIP5Q9BXF6 653 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 DPH1Q9BZG8 443 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 APMAPQ9HDC9 416 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 FAM60AQ9NP50 221 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 UFSP2Q9NUQ7 469 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 FAM86C1Q9NVL1 165 aa10.09□□□□□ -0.79
CUX1-204ENST00000393824 A0A0G2JN53 185 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 OR2W5A6NFC9 320 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 OR5H14A6NHG9 310 aa10.08□□□□□ -0.8
CUX1-204ENST00000393824 COLCA2A8K830 154 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms