RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 OR51D1Q8NGF3 324 aa9.59□□□□□ -0.87
CALD1-203ENST00000393118 SDHCQ99643 169 aaPredicted RBP9.59□□□□□ -0.87
CALD1-203ENST00000393118 WDR77Q9BQA1 342 aaPredicted RBP9.59□□□□□ -0.87
CALD1-203ENST00000393118 UFSP2Q9NUQ7 469 aa9.59□□□□□ -0.87
CALD1-203ENST00000393118 TMED7-TICAM2A0A0A6YYA0 188 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 AGPAT2O15120 278 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 SNRNP200O75643 2136 aaKnown RBP9.58□□□□□ -0.88
CALD1-203ENST00000393118 VAMP1P23763 118 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 VEGFCP49767 419 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 UBE2IP63279 158 aaKnown RBP9.58□□□□□ -0.88
CALD1-203ENST00000393118 ZNF85Q03923 595 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 GLO1Q04760 184 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 ALKBH1Q13686 389 aaKnown RBP9.58□□□□□ -0.88
CALD1-203ENST00000393118 DOC2BQ14184 412 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 CD226Q15762 336 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 RAB11BQ15907 218 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 GLYR1Q49A26 553 aaPredicted RBP9.58□□□□□ -0.88
CALD1-203ENST00000393118 FAM76BQ5HYJ3 339 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 SVBPQ8N300 66 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 OR4D9Q8NGE8 314 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 OR6N1Q8NGY5 312 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 FAM46BQ96A09 425 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 VSTM2LQ96N03 204 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 ABHD1Q96SE0 405 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 RARRES3Q9UL19 164 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 PLEKHA6Q9Y2H5 1048 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 TMED7Q9Y3B3 224 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 SDK2Q58EX2 2172 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 EPXP11678 715 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 PPICP45877 212 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 EMP2P54851 167 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 S100A12P80511 92 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 FAM74A1Q5RGS3 127 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 RNLSQ5VYX0 342 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 NPSR1Q6W5P4 371 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 ZNF417Q8TAU3 575 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 PMM1Q92871 262 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 CMSS1Q9BQ75 279 aaKnown RBP9.58□□□□□ -0.88
CALD1-203ENST00000393118 CYSLTR2Q9NS75 346 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 MED12Q93074 2177 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 PLXND1Q9Y4D7 1925 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 PLPP2O43688 288 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 LY86O95711 162 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 COL19A1Q14993 1142 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 BAIAP2L2Q6UXY1 529 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 CHRDL2Q6WN34 429 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 PLPP7Q8NBV4 271 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 OR52I2Q8NH67 350 aa9.58□□□□□ -0.88
CALD1-203ENST00000393118 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 OR6C65A6NJZ3 312 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 GOSR2O14653 212 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 LIPCP11150 499 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 SDHAP31040 664 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CDKN2AP42771 156 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 CLRN1P58418 232 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 NKPD1Q17RQ9 610 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 UBE2NLQ5JXB2 153 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 FAM180AQ6UWF9 173 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 NDUFAF7Q7L592 441 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CMTM4Q8IZR5 234 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 OR1M1Q8NGA1 313 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CASTOR1Q8WTX7 329 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 MR1Q95460 341 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 SLC25A44Q96H78 314 aaPredicted RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 WDR76Q9H967 626 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 MRPS18AQ9NVS2 196 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 FLVCR2Q9UPI3 526 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 TRBV11-1A0A0K0K1C0 115 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 FOXS1O43638 330 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 DCNP07585 359 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 HOXD4P09016 255 aaPredicted RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 CXCL3P19876 107 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 PDZK1IP1Q13113 114 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ELAVL1Q15717 326 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 SGCAQ16586 387 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 C15orf40Q8WUR7 153 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 TMEM41AQ96HV5 264 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 NOX3Q9HBY0 568 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 OR2S2Q9NQN1 319 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 KCNG2Q9UJ96 466 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ELF5Q9UKW6 265 aaPredicted RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 SF3B6Q9Y3B4 125 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 BLACEA4D250 179 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 D6RAR5 112 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ACOT7O00154 380 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 OR2T1O43869 369 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ZFPL1O95159 310 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CYB5AP00167 134 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 HCKP08631 526 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CT45A8P0DMV1 189 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CT45A9P0DMV2 189 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 PRSS3P35030 304 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 SNRPEP62304 92 aaKnown RBP9.57□□□□□ -0.88
CALD1-203ENST00000393118 ARFRP1Q13795 201 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CLINT1Q14677 625 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 ACKR1Q16570 336 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CT45A2Q5DJT8 189 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 C1QL3Q5VWW1 255 aa9.57□□□□□ -0.88
CALD1-203ENST00000393118 CD276Q5ZPR3 534 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms