RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SPATA46Q5T0L3 261 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 C10orf128Q5T292 105 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 ERICH5Q6P6B1 374 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 VTCN1Q7Z7D3 282 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 OR2T12Q8NG77 320 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 AKR7LQ8NHP1 331 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 SYNPRQ8TBG9 265 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 RACGAP1Q9H0H5 632 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 CMTM6Q9NX76 183 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 IGLV3-9A0A075B6K5 115 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 IQCMA0A1B0GVH7 501 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 C17orf100A8MU93 164 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 MGRN1O60291 552 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 SNAP29O95721 258 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 VIMP08670 466 aaKnown RBP14.16□□□□□ -0.14
PTPRK-208ENST00000392449 IFI30P13284 250 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF32P17041 273 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 MAKP20794 623 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 SRP14P37108 136 aaKnown RBP14.16□□□□□ -0.14
PTPRK-208ENST00000392449 WNT5AP41221 380 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF133P52736 654 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-208ENST00000392449 ERVK-25P63136 954 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 HSF2Q03933 536 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 SGCAQ16586 387 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 ALG10Q5BKT4 473 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 AVPI1Q5T686 147 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF101Q8IZC7 436 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 LIPHQ8WWY8 451 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 HINT3Q9NQE9 182 aaKnown RBP14.16□□□□□ -0.14
PTPRK-208ENST00000392449 MAN2C1Q9NTJ4 1040 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 CACNG2Q9Y698 323 aa14.16□□□□□ -0.14
PTPRK-208ENST00000392449 LOC100509620A0A075B734 347 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 TRAV27A0A087WT01 109 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 ENTPD5O75356 428 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 NPPAP01160 153 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 IFNA14P01570 189 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 DVL1P1P54792 670 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-208ENST00000392449 MRPS34P82930 218 aaKnown RBP14.15□□□□□ -0.14
PTPRK-208ENST00000392449 GUCY1A3Q02108 690 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 PLP2Q04941 152 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 MAPRE2Q15555 327 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 NRN1LQ496H8 165 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 OR1J1Q8NGS3 322 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF519Q8TB69 540 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 C11orf40Q8WZ69 217 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 BPIFA2Q96DR5 249 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 PRRC1Q96M27 445 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 POLR2J2Q9GZM3 115 aaKnown RBP14.15□□□□□ -0.14
PTPRK-208ENST00000392449 POLR2J3Q9H1A7 115 aaKnown RBP14.15□□□□□ -0.14
PTPRK-208ENST00000392449 TXNIPQ9H3M7 391 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 SIAEQ9HAT2 523 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 CCNB1IP1Q9NPC3 277 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF446Q9NWS9 450 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 GID8Q9NWU2 228 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF346Q9UL40 294 aaKnown RBP14.15□□□□□ -0.14
PTPRK-208ENST00000392449 HIF3AQ9Y2N7 669 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 CAPN7Q9Y6W3 813 aa14.15□□□□□ -0.14
PTPRK-208ENST00000392449 SLC22A23A1A5C7 686 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 ELOVL7A1L3X0 281 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 CENPBD1B2RD01 187 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 B4DSR2 109 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 H7C1C5 153 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 FFAR1O14842 300 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 IGF2P01344 180 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 GAAP10253 952 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 STOMP27105 288 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 APLNRP35414 380 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 RBMXP38159 391 aaKnown RBP14.14□□□□□ -0.15
PTPRK-208ENST00000392449 MPV17P39210 176 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 LMO4P61968 165 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 LCN6P62502 163 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 SELENOWP63302 87 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 MVKQ03426 396 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 FHL1Q13642 323 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 TSTQ16762 297 aaKnown RBP14.14□□□□□ -0.15
PTPRK-208ENST00000392449 TMEM154Q6P9G4 183 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 SLC25A47Q6Q0C1 308 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF771Q7L3S4 317 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-208ENST00000392449 HDDC2Q7Z4H3 204 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 DPPA2Q7Z7J5 298 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 NRMQ8IXM6 262 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 PCYOX1LQ8NBM8 494 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 OR13C2Q8NGS9 318 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 OR51A7Q8NH64 312 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 POM121L2Q96KW2 1035 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 C1orf198Q9H425 327 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 HIF1ANQ9NWT6 349 aa14.14□□□□□ -0.15
PTPRK-208ENST00000392449 C5orf49A4QMS7 147 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 PTHP01270 115 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 THRBP10828 461 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 ITGA2P17301 1181 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 LAP3P28838 519 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 RAD52P43351 418 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 SELENOVP59797 346 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 CTXN1P60606 82 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 PSG4Q00888 419 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 ST3GAL3Q11203 375 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 RFPL4BQ6ZWI9 263 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 GLCCI1Q86VQ1 547 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 LRRC75AQ8NAA5 344 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms