RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 RAET1GQ6H3X3 334 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PRSS54Q6PEW0 395 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 KCNIP4Q6PIL6 250 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TEX43Q6ZNM6 134 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TCF24Q7RTU0 167 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ASCL5Q7RTU5 278 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ERASQ7Z444 233 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 LHFPL3Q86UP9 236 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PIANPQ8IYJ0 282 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CLEC4FQ8N1N0 589 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 STK40Q8N2I9 435 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RNF148Q8N7C7 305 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CEP112Q8N8E3 955 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 MINDY2Q8NBR6 621 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 OR52H1Q8NGJ2 320 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ACTL9Q8TC94 416 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 UFD1Q92890 307 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PTX4Q96A99 478 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 FAM3DQ96BQ1 224 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TRIM44Q96DX7 344 aaPredicted RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 C20orf166-AS1Q96NR2 134 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 OXGR1Q96P68 337 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 VPS35Q96QK1 796 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RNF2Q99496 336 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RBBP8Q99708 897 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RARRES2Q99969 163 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 HSPB9Q9BQS6 159 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 NIPSNAP3BQ9BS92 247 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RSG1Q9BU20 258 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ATG10Q9H0Y0 220 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ABCG5Q9H222 651 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RPF2Q9H7B2 306 aaKnown RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ECT2Q9H8V3 914 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 LINC00574Q9H8X3 128 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 SLC17A5Q9NRA2 495 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CWC25Q9NXE8 425 aaPredicted RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 SIGLEC8Q9NYZ4 499 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 SLC17A7Q9P2U7 560 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 GNG12Q9UBI6 72 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 FETUBQ9UGM5 382 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 GSTK1Q9Y2Q3 226 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 OR10H1Q9Y4A9 318 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 OR51B4Q9Y5P0 310 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 MICAL3Q7RTP6 2002 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TSPOAP1O95153 1857 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 DYSFO75923 2080 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 IGHV3-49A0A0A0MS15 119 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 TRAV19A0A0A6YYK7 116 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 A0A0B4J2A0 478 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 IGHV7-4-1A0A0J9YVY3 117 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 FAM230AA0A1W2PPH8 454 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 SYCE3A1L190 88 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 C19orf71A6NCJ1 209 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CFAP73A6NFT4 308 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF860A6NHJ4 632 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 FAM47DPA6NHR8 397 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 OR5H1A6NKK0 313 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF726A6NNF4 738 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 A8MXQ7 604 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 NPIPA7E9PJI5 369 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CLDN5O00501 218 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 SYNGR2O43760 224 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 VEGFDO43915 354 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 MGRN1O60291 552 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 EIF1BO60739 113 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 TOM1O60784 492 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ATP5LO75964 103 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 OR4F21O95013 312 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 GOSR1O95249 250 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 UTS2O95399 124 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 AP2A1O95782 977 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 MBD3O95983 291 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ACSM4P0C7M7 580 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 NPIPA8P0DM63 369 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CD28P10747 220 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 THRAP10827 490 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 GZMHP20718 246 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 HMGB2P26583 209 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 HLA-DMAP28067 261 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CD1CP29017 333 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 IL12AP29459 219 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 APLNRP35414 380 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 EIF1P41567 113 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CASP3P42574 277 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 RFX3P48380 749 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CASP4P49662 377 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 TMED10P49755 219 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 RORCP51449 518 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF140P52738 457 aaPredicted RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ZNF138P52744 262 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 ATP1B3P54709 279 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 UBE2NP61088 152 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 NUTF2P61970 127 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CDK5Q00535 292 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 OGDHQ02218 1023 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 TNFRSF17Q02223 184 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 NCBP1Q09161 790 aaKnown RBP-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 CDH17Q12864 832 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 OR5I1Q13606 314 aa-0.05□□□□□ -2.42
SNORD28-201ENST00000384706 SCARB2Q14108 478 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms