RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ERV3-1Q14264 604 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 SHBQ15464 509 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 STK11Q15831 433 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 OR7E24Q6IFN5 339 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 FIGNL1Q6PIW4 674 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 METTL27Q8N6F8 245 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 SDR9C7Q8NEX9 313 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 MVB12AQ96EY5 273 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 DMRTA2Q96SC8 542 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 TTTY10Q9BZA0 68 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 C1orf198Q9H425 327 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 BARX1Q9HBU1 254 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 TMEM138Q9NPI0 162 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 CUTCQ9NTM9 273 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 KCNE5Q9UJ90 142 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 TMEM184BQ9Y519 407 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 PI4KAP42356 2102 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 H3BMH7 237 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 EIF4E2O60573 245 aaKnown RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF432O94892 652 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 OR2F2O95006 317 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 CD8AP01732 235 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 GALNSP34059 522 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 STARP49675 285 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 PSG6Q00889 435 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 SRSF5Q13243 272 aaKnown RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 OR2F1Q13607 317 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 SERTAD2Q14140 314 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF227Q86WZ6 799 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 D2HGDHQ8N465 521 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 OR4K13Q8NH42 304 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 THRSPQ92748 146 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 VSTM2LQ96N03 204 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 TRIM2Q9C040 744 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 APMAPQ9HDC9 416 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 SLC39A1Q9NY26 324 aa8.1□□□□□ -1.11
GPNMB-202ENST00000381990 GPN3Q9UHW5 284 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 MRTO4Q9UKD2 239 aaKnown RBP8.1□□□□□ -1.11
GPNMB-202ENST00000381990 SEC16AO15027 2179 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 RP1P56715 2156 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 DNAH14Q0VDD8 3507 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 KANTRA0A1W2PQU2 76 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 RAB19A4D1S5 217 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 TMEM150CB9EJG8 249 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 PEX12O00623 359 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ARPC3O15145 178 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 MAGEB4O15481 346 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SIX6O95475 246 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 MAOAP21397 527 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 CSF2RBP32927 897 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 CLDN12P56749 244 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 LTBQ06643 244 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 PMS2CLQ68D20 193 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ANKRD16Q6P6B7 361 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 WDR74Q6RFH5 385 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 DPY19L2P2Q6ZN68 376 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 MED25Q71SY5 747 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 FAM220AQ7Z4H9 259 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF546Q86UE3 836 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 KMT5CQ86Y97 462 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SVBPQ8N300 66 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SLC41A2Q96JW4 573 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SLC7A5P2Q9GIP4 190 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SAV1Q9H4B6 383 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 CAPN10Q9HC96 672 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 MYOZ1Q9NP98 299 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 NPIPA5A0A0B4J1W7 369 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 GGT3PA6NGU5 568 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 NPIPA7E9PJI5 369 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 HRKO00198 91 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ATG12O94817 140 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 NPIPA8P0DM63 369 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 MST1P26927 711 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ITPKBP27987 946 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 PSMB10P40306 273 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ACTBP60709 375 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ACTG1P63261 375 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SORDQ00796 357 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 OC90Q02509 493 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 FUT7Q11130 342 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 TOMM20Q15388 145 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 C2orf68Q2NKX9 166 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF684Q5T5D7 378 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 DCAF12L2Q5VW00 463 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 TTLL10Q6ZVT0 673 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 PGAP1Q75T13 922 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 MAFAQ8NHW3 353 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 GRHL3Q8TE85 626 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 RGP1Q92546 391 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SLC25A21Q9BQT8 299 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-202ENST00000381990 POTEKPQ9BYX7 375 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SLC17A5Q9NRA2 495 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 LANCL2Q9NS86 450 aa8.09□□□□□ -1.11
GPNMB-202ENST00000381990 SUSD2Q9UGT4 822 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms