RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR13C8Q8NGS7 320 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 CD200R1Q8TD46 325 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 DCUN1D4Q92564 292 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 GCDHQ92947 438 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 NXPE3Q969Y0 559 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 MRPL38Q96DV4 380 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 P2RX4Q99571 388 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 HHLA2Q9UM44 414 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 MRPS28Q9Y2Q9 187 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 TGIF2-C20orf24A0A0A6YYL0 155 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 KIR2DS1A0A191URI9 304 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SERPINE3A8MV23 424 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 B4GAT1O43505 415 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 KIR2DS4P43632 304 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 GBX1Q14549 363 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 KIR2DS1Q14954 304 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 LYG2Q86SG7 212 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CSNK1A1LQ8N752 337 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 OR5D16Q8NGK9 328 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 TVP23CQ96ET8 276 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ATOH8Q96SQ7 321 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 INTS14Q96SY0 518 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 GPR160Q9UJ42 338 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 LOC100509620A0A075B734 347 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 KDM4EB2RXH2 506 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 TRAF3IP2O43734 574 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 PAPLNO95428 1278 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SNRNP70P08621 437 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF16P17020 682 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ARL16Q0P5N6 197 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF74Q16587 644 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 GLYR1Q49A26 553 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 TMPRSS7Q7RTY8 843 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 DPY19L4Q7Z388 723 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SULF2Q8IWU5 870 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 RBP7Q96R05 134 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CDH20Q9HBT6 801 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CDRT15L2A8MXV6 281 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SLC31A2O15432 143 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 DCNP07585 359 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CST2P09228 141 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 NOVA1P51513 510 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF84P51523 738 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 PCBD1P61457 104 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SIM1P81133 766 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF616Q08AN1 781 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 FLYWCH1Q4VC44 716 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 UBALD2Q8IYN6 164 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 BOD1L2Q8IYS8 172 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 MRGPRX3Q96LB0 322 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 IMMP2LQ96T52 175 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 MBOAT4Q96T53 435 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 UBE2ZQ9H832 354 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 PDLIM7Q9NR12 457 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZCCHC3Q9NUD5 404 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 LPAR3Q9UBY5 353 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SLCO1B1Q9Y6L6 691 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CCDC163A0A0D9SF12 145 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 GABRR3A8MPY1 467 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF891A8MT65 544 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF705FA8MVS1 300 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 PTP4A3O75365 173 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF705DP0CH99 300 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF705BP0CI00 300 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CD46P15529 392 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 TCN2P20062 427 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 AQP1P29972 269 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 MXD1Q05195 221 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 RAB33AQ14088 237 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 MICBQ29980 383 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 MRM1Q6IN84 353 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 C12orf54Q6X4T0 127 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 FOXRED2Q8IWF2 684 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF619Q8N2I2 560 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 LRRC25Q8N386 305 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 ZBTB44Q8NCP5 570 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SFT2D1Q8WV19 159 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 MSI2Q96DH6 328 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 LIN28AQ9H9Z2 209 aaKnown RBP4.5□□□□□ -1.69
PTPRD-203ENST00000381196 DYNLRB1Q9NP97 96 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 KCNS2Q9ULS6 477 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 C13orf42A0A1B0GVH6 325 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 HAS3O00219 553 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 STATHP02808 62 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CCNOP22674 350 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 PSMB3P49720 205 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 SBSNQ6UWP8 590 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 APOOLQ6UXV4 268 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 AGBL5Q8NDL9 886 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 OR5D14Q8NGL3 314 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 OR5M8Q8NGP6 311 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 NFKBIDQ8NI38 313 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 FOXN4Q96NZ1 517 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 OR1F2PQ96R84 312 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 NICN1Q9BSH3 213 aa4.5□□□□□ -1.69
PTPRD-203ENST00000381196 CHD3Q12873 2000 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms