RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 MYADMQ96S97 322 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ALG12Q9BV10 488 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 WDR76Q9H967 626 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 NRIP3Q9NQ35 241 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 SDHAF3Q9NRP4 125 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 LYPD3O95274 346 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 AGR2O95994 175 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 PRF1P14222 555 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 TGIF1Q15583 401 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ARHGAP11AQ6P4F7 1023 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 MOB3CQ70IA8 216 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF546Q86UE3 836 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 C7orf61Q8IZ16 206 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 S100A16Q96FQ6 103 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 GFI1Q99684 422 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 TRAV8-7A0A075B6U6 113 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 TRAV18A0A075B6X5 111 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 UBE2QL1A1L167 161 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ELOA3DA6NLF2 546 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF705EA8MWA4 302 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ACAA2P42765 397 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 TAS2R43P59537 309 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 CLINT1Q14677 625 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 CSRP2Q16527 193 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ELOA3BQ3SY89 546 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ETV3LQ6ZN32 361 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ELOA3Q8NG57 546 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 TSEN15Q8WW01 171 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 TMEM106AQ96A25 262 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 BMFQ96LC9 184 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 OR8D2Q9GZM6 311 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 SYT4Q9H2B2 425 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 GAREM1Q9H706 876 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 TREM1Q9NP99 234 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 PNO1Q9NRX1 252 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 OR5V1Q9UGF6 321 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 PILRAQ9UKJ1 303 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 V9GY05 133 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 GPR37O15354 613 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ACTL6AO96019 429 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ADH1BP00325 375 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 CD63P08962 238 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 GAAP10253 952 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF10P21506 573 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 EFNB2P52799 333 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ILF3Q12906 894 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ECH1Q13011 328 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 LIN54Q6MZP7 749 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 PXKQ7Z7A4 578 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 RLN3Q8WXF3 142 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 DNAJB12Q9NXW2 375 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 FARSAQ9Y285 508 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 NUP210Q8TEM1 1887 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 ABCA7Q8IZY2 2146 aa11.31□□□□□ -0.6
PRPF40B-202ENST00000380281 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF879B4DU55 563 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 WRBO00258 174 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 KCNAB3O43448 404 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 CCKBRP32239 447 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 Q6ZSR6 202 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 LRRTM1Q86UE6 522 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF565Q8N9K5 539 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 RGP1Q92546 391 aaPredicted RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 MMABQ96EY8 250 aaPredicted RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 WDR92Q96MX6 357 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 RXFP3Q9NSD7 469 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 MBD2Q9UBB5 411 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 NPFFR2Q9Y5X5 522 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 MAP1BP46821 2468 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 TMEM272A0A1B0GTI8 110 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 METTL21EPA6NDL7 271 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 CYR61O00622 381 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 THBS1P07996 1170 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 SLC2A5P22732 501 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 CBFBQ13951 182 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM199XQ6PEV8 388 aaPredicted RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF627Q7L945 461 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms