RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MTCH2Q9Y6C9 303 aa6.81□□□□□ -1.32
CDKL5-201ENST00000379989 A0A087WZY1 265 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 A0A1B0GTI1 187 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SMAD9O15198 467 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF749O43361 778 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PRICKLE3O43900 615 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 GGCTO75223 188 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PDYNP01213 254 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 IFNW1P05000 195 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PCCBP05166 539 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 IRF2P14316 349 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 TBPP20226 339 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 AOAHP28039 575 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 P2RX1P51575 399 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 CBFBQ13951 182 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 HERPUD1Q15011 391 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 RHEBQ15382 184 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 DCST1Q5T197 706 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF529Q6P280 563 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM220Q6QAJ8 160 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 KCTD9Q7L273 389 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PXKQ7Z7A4 578 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PIANPQ8IYJ0 282 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 APCDD1Q8J025 514 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 STEAP2Q8NFT2 490 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR1J1Q8NGS3 322 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PPP1R1CQ8WVI7 109 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 APIPQ96GX9 242 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 RIOK2Q9BVS4 552 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PLA2G12AQ9BZM1 189 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF350Q9GZX5 532 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ATG5Q9H1Y0 275 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SLC23A2Q9UGH3 650 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 IL36AQ9UHA7 158 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 KIAA1549LQ6ZVL6 1849 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF705GA8MUZ8 300 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 LOC730098B7Z3J9 87 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 J3QW42 95 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 DCTN6O00399 190 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 XRCC3O43542 346 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SLCO2B1O94956 709 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR2C1O95371 312 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ATP1B2P14415 290 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 EPHA1P21709 976 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 CD82P27701 267 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SRSF4Q08170 494 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 DUSP5Q16690 384 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM52BQ4KMG9 183 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ARL9Q6T311 187 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 FRRS1Q6ZNA5 592 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SMIM15Q7Z3B0 74 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 VN1R2Q8NFZ6 395 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR5M8Q8NGP6 311 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR4K15Q8NH41 348 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 CSGALNACT1Q8TDX6 532 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 RELTQ969Z4 430 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 APOLD1Q96LR9 279 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF426Q9BUY5 554 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 EBPLQ9BY08 206 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 CIPCQ9C0C6 399 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SYT4Q9H2B2 425 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SRMSQ9H3Y6 488 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 BRF2Q9HAW0 419 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 CYTL1Q9NRR1 136 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 GPR173Q9NS66 373 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 GPR34Q9UPC5 381 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 A0A1W2PRU2 124 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SYNDIG1LA6NDD5 238 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 FAAHO00519 579 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 STK16O75716 305 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OPN1LWP04000 364 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 COX7A2P14406 83 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PPIBP23284 216 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 CDH11P55287 796 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 NAAAQ02083 359 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 BDH1Q02338 343 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 DDX39BQ13838 428 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 KHDRBS2Q5VWX1 349 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 LEMD1Q68G75 181 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR2T2Q6IF00 324 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 NDUFAF7Q7L592 441 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 FRMD1Q8N878 549 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR52N4Q8NGI2 321 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 MRGPRDQ8TDS7 321 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SLC25A43Q8WUT9 341 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 METTL21AQ8WXB1 218 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 UBE2E3Q969T4 207 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF775Q96BV0 537 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SAT2Q96F10 170 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-201ENST00000379989 SEC22AQ96IW7 307 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 OR5B2Q96R09 309 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 TIMP4Q99727 224 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 POTEKPQ9BYX7 375 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 APMAPQ9HDC9 416 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 COMMD9Q9P000 198 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 GNG8Q9UK08 70 aa6.8□□□□□ -1.32
CDKL5-201ENST00000379989 PADI1Q9ULC6 663 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms