RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 MDP1Q86V88 176 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 SDR9C7Q8NEX9 313 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 KBTBD8Q8NFY9 601 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 OR4K13Q8NH42 304 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 LRTOMTQ8WZ04 291 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 FBXW5Q969U6 566 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 NMD3Q96D46 503 aaKnown RBP12.65□□□□□ -0.38
UBE4B-203ENST00000377153 CENPNQ96H22 339 aaPredicted RBP12.65□□□□□ -0.38
UBE4B-203ENST00000377153 NMNAT3Q96T66 252 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 SH3GL3Q99963 347 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 TMEM204Q9BSN7 226 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 NTN4Q9HB63 628 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 FAIMQ9NVQ4 179 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
UBE4B-203ENST00000377153 HRNRQ86YZ3 2850 aaPredicted RBP12.65□□□□□ -0.38
UBE4B-203ENST00000377153 APCP25054 2843 aa12.65□□□□□ -0.38
UBE4B-203ENST00000377153 ABCA4P78363 2273 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 IGHV1-18A0A0C4DH31 117 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 BHLHE40O14503 412 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 RAF1P04049 648 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 OSMP13725 252 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
UBE4B-203ENST00000377153 CTLA4P16410 223 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 ZNF3P17036 446 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PRKACGP22612 351 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
UBE4B-203ENST00000377153 CDAP32320 146 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 GIPRP48546 466 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 CENPAP49450 140 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PCBD1P61457 104 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 RAB1AP62820 205 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 GLO1Q04760 184 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PLP2Q04941 152 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PIGFQ07326 219 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBE4B-203ENST00000377153 SLC35F1Q5T1Q4 408 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 SLC27A4Q6P1M0 643 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PTCHD4Q6ZW05 846 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 AMIGO2Q86SJ2 522 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 SKA3Q8IX90 412 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 LNX2Q8N448 690 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 OR52E2Q8NGJ4 325 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 OR8D4Q8NGM9 314 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 AKAP1Q92667 903 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PRRG3Q9BZD7 231 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 SEMA6AQ9H2E6 1030 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 C1orf198Q9H425 327 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PLEKHF2Q9H8W4 249 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 RPRD1BQ9NQG5 326 aaKnown RBP12.64□□□□□ -0.39
UBE4B-203ENST00000377153 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
UBE4B-203ENST00000377153 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 KLHL21Q9UJP4 597 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 POLR1DQ9Y2S0 133 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 UGT2A1Q9Y4X1 527 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 ITPR2Q14571 2701 aa12.64□□□□□ -0.39
UBE4B-203ENST00000377153 IGKV1D-43A0A0B4J1Z2 117 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 IQCMA0A1B0GVH7 501 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 C12orf71A8MTZ7 269 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 ATP6V1G2-DDX39BF2Z307 99 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 HS3ST1O14792 307 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 PTHP01270 115 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 CECR9P0C854 216 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 PAICSP22234 425 aaKnown RBP12.63□□□□□ -0.39
UBE4B-203ENST00000377153 DNASE1P24855 282 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 GRK5P34947 590 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 CDKN2AP42771 156 aaKnown RBP12.63□□□□□ -0.39
UBE4B-203ENST00000377153 HSF2Q03933 536 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 PGGHGQ32M88 737 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
UBE4B-203ENST00000377153 FAHD1Q6P587 224 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 ICA1LQ8NDH6 482 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 OR2T4Q8NH00 348 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 HTRA1Q92743 480 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 NINJ1Q92982 152 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 PLEKHA8Q96JA3 519 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 CCL19Q99731 98 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 OSBPL10Q9BXB5 764 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 NUAK2Q9H093 628 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 GABARAPL1Q9H0R8 117 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 ST6GALNAC2Q9UJ37 374 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 OAZ3Q9UMX2 235 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 ORC6Q9Y5N6 252 aa12.63□□□□□ -0.39
UBE4B-203ENST00000377153 A0A1W2PPR1 153 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 PLAUP00749 431 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 HLA-DQA2P01906 255 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 CST2P09228 141 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 LAP3P28838 519 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 GALK2Q01415 458 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 NAAAQ02083 359 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
UBE4B-203ENST00000377153 FOXL2NBQ6ZUU3 175 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms