RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SIGLEC5O15389 551 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 SLC19A2O60779 497 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 CXCL3P19876 107 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 TSFMP43897 325 aaKnown RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 NANOS3P60323 173 aaKnown RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 SIGLEC14Q08ET2 396 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 MLC1Q15049 377 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ESCO2Q56NI9 601 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 SLC18B1Q6NT16 456 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ZNF704Q6ZNC4 412 aaPredicted RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 RNF113BQ8IZP6 322 aaKnown RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 PTPMT1Q8WUK0 201 aaPredicted RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 TAS2R4Q9NYW5 299 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 PFDN2Q9UHV9 154 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ZMIZ1Q9ULJ6 1067 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 LSM2Q9Y333 95 aaKnown RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 A0A1B0GX78 115 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 PDCD5O14737 125 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 OR2T7P0C7T2 308 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 CTLA4P16410 223 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 CDK2P24941 298 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 FOXF1Q12946 379 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 FAM57BQ71RH2 274 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 NR2C2APQ86WQ0 139 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 OR2T27Q8NH04 317 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 OR52N1Q8NH53 320 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 OR14L1PQ8NHC6 308 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 GPR148Q8TDV2 347 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ST6GALNAC5Q9BVH7 336 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 OR2S2Q9NQN1 319 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 SERINC1Q9NRX5 453 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ZNF878C9JN71 531 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ITGA3P26006 1051 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 CLDN17P56750 224 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 SLC25A45Q8N413 288 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 ZNF680Q8NEM1 530 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 FGF20Q9NP95 211 aaPredicted RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
DDR1-227ENST00000376570 AKAP7Q9P0M2 348 aaPredicted RBP10.57□□□□□ -0.72
DDR1-227ENST00000376570 FAM221AA4D161 298 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 TMEM235A6NFC5 223 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 SYT7O43581 403 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 SCGB1D2O95969 90 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 TCRBP04435 133 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 PNMTP11086 282 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 ETV6P41212 452 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 FRKP42685 505 aaPredicted RBP10.56□□□□□ -0.72
DDR1-227ENST00000376570 RPL35P42766 123 aaKnown RBP10.56□□□□□ -0.72
DDR1-227ENST00000376570 DIO1P49895 249 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 CBFBQ13951 182 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 CDK5R1Q15078 307 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 LRRC28Q86X40 367 aaPredicted RBP10.56□□□□□ -0.72
DDR1-227ENST00000376570 SLC38A9Q8NBW4 561 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 COLQQ9Y215 455 aaPredicted RBP10.56□□□□□ -0.72
DDR1-227ENST00000376570 A0A087WUJ7 227 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 A0A1B0GVI7 797 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 H3BUI4 141 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 GMDSO60547 372 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 SLC22A5O76082 557 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 GLO1Q04760 184 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 HLA-BQ31612 363 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 SLC46A1Q96NT5 459 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 ZNF160Q9HCG1 818 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 ASH2LQ9UBL3 628 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 FBXL2Q9UKC9 423 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 A0A0B4J293 547 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 ATP6V1G2-DDX39BF2Z307 99 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 GOSR2O14653 212 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 NUDT21O43809 227 aaKnown RBP10.56□□□□□ -0.72
DDR1-227ENST00000376570 C1QBP02746 253 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 PRKACAP17612 351 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 CSF2RBP32927 897 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 YIF1BQ5BJH7 314 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 PYHIN1Q6K0P9 492 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 KCTD18Q6PI47 426 aaPredicted RBP10.56□□□□□ -0.72
DDR1-227ENST00000376570 TMEM205Q6UW68 189 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 TMEM234Q8WY98 164 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 NR4A3Q92570 626 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 MED30Q96HR3 178 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 WWTR1Q9GZV5 400 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 MMP25Q9NPA2 562 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 ACAD8Q9UKU7 415 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 DSPPQ9NZW4 1301 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 COL4A3Q01955 1670 aa10.56□□□□□ -0.72
DDR1-227ENST00000376570 TRAV8-7A0A075B6U6 113 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 NPIPA2E9PIF3 369 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 NPIPA3F8WFD2 350 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 LMX1BO60663 402 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 GLCEO94923 617 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 KNG1P01042 644 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 RAD52P43351 418 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 GPR3P46089 330 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 PITPNAQ00169 270 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 PLA2G7Q13093 441 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 ALKBH1Q13686 389 aaKnown RBP10.55□□□□□ -0.72
DDR1-227ENST00000376570 RAB11BQ15907 218 aa10.55□□□□□ -0.72
DDR1-227ENST00000376570 ZNF74Q16587 644 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms