RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 AKAIN1P0CW23 69 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 CTSEP14091 401 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
MSH5-204ENST00000375755 GRPRP30550 384 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 CSF2RBP32927 897 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 EFNB2P52799 333 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PNLIPRP2P54317 469 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 ZNF345Q14585 488 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 TAF13Q15543 124 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PLEKHN1Q494U1 663 aaPredicted RBP11.71□□□□□ -0.53
MSH5-204ENST00000375755 MFSD12Q6NUT3 480 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 TMPRSS12Q86WS5 348 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 OR7G2Q8NG99 324 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 PTDSS2Q9BVG9 487 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 SLC2A4RGQ9NR83 387 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 C14orf105Q9NVL8 296 aa11.71□□□□□ -0.53
MSH5-204ENST00000375755 DHCR7Q9UBM7 475 aaKnown RBP11.71□□□□□ -0.53
MSH5-204ENST00000375755 ASXL3Q9C0F0 2248 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 THADAQ6YHU6 1953 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 TTLL8A6PVC2 850 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 SNAPINO95295 136 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 IFNGP01579 166 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 DLSTP36957 453 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 FHL1Q13642 323 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 MRPL2Q5T653 305 aaKnown RBP11.71□□□□□ -0.54
MSH5-204ENST00000375755 C11orf87Q6NUJ2 197 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 POMGNT2Q8NAT1 580 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 TMEM52Q8NDY8 209 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 ZNF251Q9BRH9 671 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 TMEM231Q9H6L2 316 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 PILRAQ9UKJ1 303 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 FBXO4Q9UKT5 387 aa11.71□□□□□ -0.54
MSH5-204ENST00000375755 FAM25EA8MYX2 175 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 H0YGG7 62 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 CCSO14618 274 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 OR2T1O43869 369 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 IGLV3-19P01714 112 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 ITGB2P05107 769 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 SMIM6P0DI80 62 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 EIF1P41567 113 aaKnown RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 ARF3P61204 181 aaPredicted RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 DUSP5Q16690 384 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 PTCRAQ6ISU1 281 aaPredicted RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 PGAP1Q75T13 922 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 RPS4Y2Q8TD47 263 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 GRHL3Q8TE85 626 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 MRI1Q9BV20 369 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 TAS2R8Q9NYW2 309 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 FADS1O60427 444 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 LDB3O75112 727 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 PMS2P2O95744 297 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 RPS15AP62244 130 aaKnown RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 DUSP8Q13202 625 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 HABP2Q14520 560 aaPredicted RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 KIR2DS3Q14952 304 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 EIPR1Q53HC9 387 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 NKAIN2Q5VXU1 208 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 ZNF813Q6ZN06 617 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 LRRTM1Q86UE6 522 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 OR5M8Q8NGP6 311 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 TM4SF19Q96DZ7 209 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 KLHDC7BQ96G42 594 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 ALX4Q9H161 411 aaPredicted RBP11.7□□□□□ -0.54
MSH5-204ENST00000375755 FBXO34Q9NWN3 711 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 KCNE5Q9UJ90 142 aa11.7□□□□□ -0.54
MSH5-204ENST00000375755 GGT3PA6NGU5 568 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 F5H0A9 414 aaPredicted RBP11.69□□□□□ -0.54
MSH5-204ENST00000375755 PEX12O00623 359 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 CSRP1P21291 193 aaKnown RBP11.69□□□□□ -0.54
MSH5-204ENST00000375755 CCR5P51681 352 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 HHEXQ03014 270 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 UNQ6126/PRO20091Q6UXV3 157 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 PAQR8Q8TEZ7 354 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 SDF2Q99470 211 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 STEAP1Q9UHE8 339 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 CEP192Q8TEP8 1941 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 TRAV18A0A075B6X5 111 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 DUXAA6NLW8 204 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 SULT2B1O00204 365 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 YKT6O15498 198 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 FGF16O43320 207 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 RPP14O95059 124 aaKnown RBP11.69□□□□□ -0.54
MSH5-204ENST00000375755 MAS1P04201 325 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 SLC25A4P12235 298 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 ST6GAL1P15907 406 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 SLC6A6P31641 620 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 CASRP41180 1078 aa11.69□□□□□ -0.54
MSH5-204ENST00000375755 ATP1B3P54709 279 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms