RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PIGTQ969N2 578 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GLS2Q9UI32 602 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SDK1Q7Z5N4 2213 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 F10P00742 488 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PPT1P50897 306 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 EPHA4P54764 986 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 HNF4GQ14541 408 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 EXOSC6Q5RKV6 272 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GLIPR1L1Q6UWM5 242 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR2L13Q8N349 312 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SLC2A12Q8TD20 617 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 EXOSC3Q9NQT5 275 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PTTG3PQ9NZH4 202 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PIGLQ9Y2B2 252 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MTCL1Q9Y4B5 1905 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LOC107986453A0A1B0GWG9 222 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SERTM1A2A2V5 107 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 IFITM5A6NNB3 132 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 KRBOX1C9JBD0 128 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 BRINP1O60477 761 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 RGS11O94810 467 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PMS2P2O95744 297 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 THBS1P07996 1170 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MSL3P1P0C860 447 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 CX3CR1P49238 355 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 ARF1P84077 181 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SMUG1Q53HV7 270 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 RNF165Q6ZSG1 346 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 KLHDC8BQ8IXV7 354 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR11H7Q8NGC8 314 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR6M1Q8NGM8 313 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TSLPQ969D9 159 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 ERVMER34-1Q9H9K5 563 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 FBRSQ9HAH7 460 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MCCC2Q9HCC0 563 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PCYT1BQ9Y5K3 369 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 HSD17B6O14756 317 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SYNGR4O95473 234 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 BPNT1O95861 308 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 HOXD11P31277 338 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 CSNK1A1P48729 337 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TPMTP51580 245 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM244Q5VVB8 128 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LIPNQ5VXI9 398 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR10K2Q6IF99 312 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 FAM122CQ6P4D5 195 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 RCBTB1Q8NDN9 531 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 BMFQ96LC9 184 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SCML1Q9UN30 329 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 A0A0U1RQK1 487 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 BLACEA4D250 179 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LINC01553A4QN01 128 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 DPM1O60762 260 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 IFNA17P01571 189 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LIMS3P0CW19 117 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LIMS4P0CW20 117 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LBX1P52954 281 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GSG1Q2KHT4 349 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 C1QTNF12Q5T7M4 302 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LAIR2Q6ISS4 152 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 CCDC54Q8NEL0 328 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR1S1Q8NH92 325 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GPR119Q8TDV5 335 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GLYATL2Q8WU03 294 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 ASB16Q96NS5 453 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 WFDC6Q9BQY6 131 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SLC19A3Q9BZV2 496 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR10A2Q9H208 303 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 C8orf33Q9H7E9 229 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 RARRES3Q9UL19 164 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM272A0A1B0GTI8 110 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MEGF11A6BM72 1044 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 HRH1P35367 487 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 EEF1A1P68104 462 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TPBGQ13641 420 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PEA15Q15121 130 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PHLDA2Q53GA4 152 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 C1orf140Q5VVS0 124 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 RFLNBQ8N5W9 214 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR4S1Q8NGB4 309 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SGCZQ96LD1 299 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 EMC6Q9BV81 110 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PLA2G2FQ9BZM2 168 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 BCL2L10Q9HD36 194 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 NXT1Q9UKK6 140 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OIP5O43482 229 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PLRG1O43660 514 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 NSA2O95478 260 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 CD79AP11912 226 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 P2RX3P56373 397 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 BDH1Q02338 343 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM176BQ3YBM2 270 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GLYR1Q49A26 553 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LHX8Q68G74 356 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM88Q6PEY1 159 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 NINJ1Q92982 152 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MRPS2Q9Y399 296 aaKnown RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 DOCK3Q8IZD9 2030 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms