RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 EVPLQ92817 2033 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 DDX60LQ5H9U9 1706 aaKnown RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ITGB8P26012 769 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 WASP42768 502 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 TPPP2P59282 170 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 THEM4Q5T1C6 240 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 MVB12AQ96EY5 273 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PCED1AQ9H1Q7 454 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF223Q9UK11 482 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PLAGL1Q9UM63 463 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 OPN1MWP04001 364 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 OPN1MW2P0DN77 364 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 OPN1MW3P0DN78 364 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 C17orf107Q6ZR85 190 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 CPT1CQ8TCG5 803 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 C2orf50Q96LR7 162 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ENKD1Q9H0I2 346 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 CSAG2Q9Y5P2 127 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 TRAV27A0A087WT01 109 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 IGLV3-25P01717 112 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 SLC5A6Q9Y289 635 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 RTCAO00442 366 aaKnown RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF593O00488 134 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 FXYD4P59646 89 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 SYPL1Q16563 259 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 MOB1BQ7L9L4 216 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ADIPOR2Q86V24 386 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 TMEM151BQ8IW70 566 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PGA3P0DJD8 388 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 CTRB1P17538 263 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 C12orf73Q69YU5 71 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 CTRB2Q6GPI1 263 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 MEX3BQ6ZN04 569 aaKnown RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 LANCL3Q6ZV70 420 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PP6455Q8WZ26 134 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 LINC00615Q96LM1 132 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 NXF2Q9GZY0 626 aaKnown RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 CDH20Q9HBT6 801 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 APOBEC3BQ9UH17 382 aaKnown RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PRAMEF27A3QJZ7 478 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PRAMEF9Q5VWM5 478 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 MED9Q9NWA0 146 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 NAT1P18440 290 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 TBPL2Q6SJ96 375 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 SGPP1Q9BX95 441 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 COQ3Q9NZJ6 369 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 C19orf53Q9UNZ5 99 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 A6NLC8 198 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CD1AP06126 327 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CYC1P08574 325 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 IQCF3P0C7M6 154 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 FUT4P22083 530 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ADAM5Q6NVV9 412 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 DEFB118Q96PH6 123 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ALX4Q9H161 411 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ASH2LQ9UBL3 628 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TRBV5-4A0A0C4DH59 114 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 SLC5A10A0PJK1 596 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A6P0DMU7 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A5P0DMU8 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A7P0DMV0 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A8P0DMV1 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A9P0DMV2 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 PCMT1P22061 227 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 FOXK1P85037 733 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 MAP4K2Q12851 820 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TIGITQ495A1 244 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A2Q5DJT8 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 WDR73Q6P4I2 378 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ABHD17CQ6PCB6 329 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 SIGLECL1Q8N7X8 197 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ANKLE1Q8NAG6 615 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CT45A3Q8NHU0 189 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 PIGQQ9BRB3 760 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 WDR83Q9BRX9 315 aaKnown RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TMED3Q9Y3Q3 217 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 WNT6Q9Y6F9 365 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 RAB27BO00194 218 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 HOXB5P09067 269 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 SELEP16581 610 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 APCDD1Q8J025 514 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ZBTB44Q8NCP5 570 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 SLC35B3Q9H1N7 401 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 PDGFBP01127 241 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 GRPRP30550 384 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 VASNQ6EMK4 673 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 RPUSD3Q6P087 351 aaKnown RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 OR51A4Q8NGJ6 313 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 LCORQ96JN0 433 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CXorf36Q9H7Y0 433 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TXNRD2Q9NNW7 524 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 BATFQ16520 125 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 HMGB4Q8WW32 186 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms