RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 ZNF679Q8IYX0 411 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 PRR22Q8IZ63 422 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 SPICQ8N5J4 248 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 ZNF441Q8N8Z8 693 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 TSEN15Q8WW01 171 aaKnown RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 MCHR2Q969V1 340 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 TMEM106AQ96A25 262 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 ORAI1Q96D31 301 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 PTDSS2Q9BVG9 487 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 CLEC4MQ9H2X3 399 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 NKIRAS2Q9NYR9 191 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 B9D1Q9UPM9 204 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 TMED7Q9Y3B3 224 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 CACNA1BQ00975 2339 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 IGHV1OR21-1A0A087WYE8 117 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 A0A1B0GX78 115 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 A6NIZ1 184 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 TM4SF5O14894 197 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 PRKNO60260 465 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-203ENST00000374490 TSC22D2O75157 780 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 NPIPB7O75200 414 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 IFNA7P01567 189 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 IFNGR1P15260 489 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 CRABP1P29762 137 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 KIR3DL2P43630 455 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 CLDN12P56749 244 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 RAP1BP61224 184 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 RAP1AP62834 184 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 KCNAB1Q14722 419 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 MFSD13AQ14CX5 517 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 NSDHLQ15738 373 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 RAB11BQ15907 218 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 TEX261Q6UWH6 196 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 SEZ6L2Q6UXD5 910 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 SERPINA12Q8IW75 414 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 GLB1L2Q8IW92 636 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 PLPP5Q8NEB5 264 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 OR1L3Q8NH93 324 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-203ENST00000374490 TMEM234Q8WY98 164 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 SLC41A2Q96JW4 573 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 ELF4Q99607 663 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-203ENST00000374490 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 SMOC1Q9H4F8 434 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 U3KQ87 197 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 COL5A1P20908 1838 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-203ENST00000374490 TNRC6BQ9UPQ9 1833 aaKnown RBP12.57□□□□□ -0.4
HMGCL-203ENST00000374490 ACACBO00763 2458 aa12.57□□□□□ -0.4
HMGCL-203ENST00000374490 EPG5Q9HCE0 2579 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 LINC00862A6NCI5 91 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 H7C417 338 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
HMGCL-203ENST00000374490 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
HMGCL-203ENST00000374490 RBBP9O75884 186 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 SLC22A5O76082 557 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 SYPP08247 313 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 MAGEB1P43366 347 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 SUMO3P55854 103 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-203ENST00000374490 ACKR1Q16570 336 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 WDR38Q5JTN6 314 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 TEX30Q5JUR7 227 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 NKAIN2Q5VXU1 208 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 MTFR2Q6P444 385 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 ANKRD16Q6P6B7 361 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 DNM1P34Q6PK57 102 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 PRSS35Q8N3Z0 413 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 SORCS2Q96PQ0 1159 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 EDEM2Q9BV94 578 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 ELOVL3Q9HB03 270 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 NOX3Q9HBY0 568 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 NPDC1Q9NQX5 325 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-203ENST00000374490 MRPL15Q9P015 296 aaKnown RBP12.56□□□□□ -0.4
HMGCL-203ENST00000374490 MTFP1Q9UDX5 166 aa12.56□□□□□ -0.4
HMGCL-203ENST00000374490 TRAV8-7A0A075B6U6 113 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 IGLV1-36A0A0B4J1U3 117 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 C11orf98E9PRG8 122 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 FADS1O60427 444 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 CREBL2O60519 120 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-203ENST00000374490 HLA-DQA2P01906 255 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 HPXP02790 462 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 MAS1P04201 325 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 CD2P06729 351 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 GIPP09681 153 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-203ENST00000374490 FSTP19883 344 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 CSRP1P21291 193 aaKnown RBP12.55□□□□□ -0.4
HMGCL-203ENST00000374490 ABCD3P28288 659 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 OR3A3P47888 321 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 VEGFCP49767 419 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 RIDAP52758 137 aaKnown RBP12.55□□□□□ -0.4
HMGCL-203ENST00000374490 MEP1BQ16820 701 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 ESCO2Q56NI9 601 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 NLRC3Q7RTR2 1065 aa12.55□□□□□ -0.4
HMGCL-203ENST00000374490 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms