RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 HBMQ6B0K9 141 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 RPL7L1Q6DKI1 246 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 SFT2D1Q8WV19 159 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 GHSRQ92847 366 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF597Q96LX8 424 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 NGBQ9NPG2 151 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 MRPS2Q9Y399 296 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 GALR3O60755 368 aaPredicted RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 RFC3P40938 356 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 IAH1Q2TAA2 248 aaPredicted RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 SFXN4Q6P4A7 337 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 BHLHE23Q8NDY6 225 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 MYEOVQ96EZ4 313 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF331Q9NQX6 463 aaPredicted RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 A0A1B0GUL6 1792 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 HCRTR1O43613 425 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 ACKR3P25106 362 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 UBE2G1P62253 170 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 VWA2Q5GFL6 755 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 FRMPD2BQ6IN97 320 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 WDR5BQ86VZ2 330 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 AMDHD1Q96NU7 426 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 GPR45Q9Y5Y3 372 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 BLACEA4D250 179 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 AQP7P3A6NL99 342 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 SRP9P49458 86 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 REEP5Q00765 189 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 OR51A4Q8NGJ6 313 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 OR51A2Q8NGJ7 313 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 EMG1Q92979 244 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 UGT2A1Q9Y4X1 527 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 ADAM10O14672 748 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 PPP1R2P9O14990 202 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 YIF1AO95070 293 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 CALCBP10092 127 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 MFAP5Q13361 173 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 DPPA2Q7Z7J5 298 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 CNTN4Q8IWV2 1026 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 OR5AS1Q8N127 324 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 SMOC1Q9H4F8 434 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 LOXL2Q9Y4K0 774 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 LRIT2A6NDA9 550 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 HPNP05981 417 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 RD3LP0DJH9 198 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 EIF2DP41214 584 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 KCTD11Q693B1 232 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 OR1N1Q8NGS0 311 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 PRR14Q9BWN1 585 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 EXOSC3Q9NQT5 275 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 ALDOCP09972 364 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 CD1CP29017 333 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 STEAP1BQ6NZ63 245 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 YRDCQ86U90 279 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 NECAP2Q9NVZ3 263 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 PIGLQ9Y2B2 252 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 BOLA1Q9Y3E2 137 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 NME2P1O60361 137 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 SULT1C4O75897 302 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 PSMB1P20618 241 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 RPL13AP40429 203 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 FCN2Q15485 313 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 MDGA2Q7Z553 956 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 OR2G3Q8NGZ4 309 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM106AQ96A25 262 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 LCORQ96JN0 433 aaPredicted RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 TAS2R5Q9NYW4 299 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 OR5K3A6NET4 321 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 KLRC4-KLRK1H3BQV0 150 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 CSO75390 466 aaKnown RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 TBPP20226 339 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 DCAF7P61962 342 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 KIAA0141Q14154 515 aaPredicted RBP13.15□□□□□ -0.3
TRAF1-201ENST00000373887 PYCR3Q53H96 274 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 SLCO4C1Q6ZQN7 724 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 OR6V1Q8N148 313 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 SLC35D1Q9NTN3 355 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
TRAF1-201ENST00000373887 hCG_1809904A0A1W2PP81 198 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 A0A1W2PPE2 198 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 A0A1W2PR64 198 aa13.15□□□□□ -0.31
TRAF1-201ENST00000373887 A0A1W2PRV1 198 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms