RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TIGITQ495A1 244 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR9K2Q8NGE7 335 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 MCHR2Q969V1 340 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 BMFQ96LC9 184 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 DDX60LQ5H9U9 1706 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 GJB3O75712 270 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 CLDN1O95832 211 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 CD46P15529 392 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 PLP1P60201 277 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 GPLD1P80108 840 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF684Q5T5D7 378 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 C6orf120Q7Z4R8 191 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR13H1Q8NG92 308 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 TMEM231Q9H6L2 316 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 EGLN3Q9H6Z9 239 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 INPP5EQ9NRR6 644 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 XKRY2A2RUG3 117 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 TBPP20226 339 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 COL5A1-AS1Q5SY13 56 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 CD200R1Q8TD46 325 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 FUBP1Q96AE4 644 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 SPNS1Q9H2V7 528 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 GPR52Q9Y2T5 361 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 TRBV11-1A0A0K0K1C0 115 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 ANHXE9PGG2 379 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 HMGA1P17096 107 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 SQSTM1Q13501 440 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 STT3BQ8TCJ2 826 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 C1GALT1Q9NS00 363 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 LRP5O75197 1615 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 AQP7P3A6NL99 342 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 SOCS6O14544 535 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 GABRR1P24046 479 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 MMP11P24347 488 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 TMEM244Q5VVB8 128 aa12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 INSM2Q96T92 566 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-202ENST00000372190 A6NIN4 97 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 DBX1A6NMT0 343 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 BET1O15155 118 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ECI1P42126 302 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 MPEG1Q2M385 716 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF528Q3MIS6 628 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 HMGN2P46Q86SG4 172 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ISCA2Q86U28 154 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 C19orf47Q8N9M1 422 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR5D14Q8NGL3 314 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 SORT1Q99523 831 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 SLC30A3Q99726 388 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 C6orf106Q9H6K1 298 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 SLC23A2Q9UGH3 650 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 GDF1P27539 372 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 PTGER4P35408 488 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 RPS26P62854 115 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 EXOSC2Q13868 293 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 RSPO2Q6UXX9 243 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 CLECL1Q8IZS7 167 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 TMEM217Q8N7C4 229 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR4F5Q8NH21 305 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR4K13Q8NH42 304 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ECHDC3Q96DC8 303 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 GNPNAT1Q96EK6 184 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 AKR1E2Q96JD6 320 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR4F4Q96R69 305 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 MRPL13Q9BYD1 178 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 TMEM9BQ9NQ34 198 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 PRSS21Q9Y6M0 314 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ITGB8P26012 769 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 IAH1Q2TAA2 248 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 RPUSD3Q6P087 351 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF66Q6ZN08 573 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 ABHD6Q9BV23 337 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 AGPAT4Q9NRZ5 378 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 RNF24Q9Y225 148 aa12.96□□□□□ -0.33
RAPGEF1-202ENST00000372190 DOCK1Q14185 1865 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 GPR31O00270 319 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 UBL3O95164 117 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 LY86O95711 162 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 KLKB1P03952 638 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 DPP4P27487 766 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 MPPED2Q15777 294 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 SBSNQ6UWP8 590 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 Q6ZTK2 550 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 OR52N2Q8NGI0 321 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 SCMH1Q96GD3 660 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 MUTYHQ9UIF7 546 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 ZCWPW2A0A1B0GU75 182 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 ACAA1P09110 424 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 ICAM2P13598 275 aa12.96□□□□□ -0.34
RAPGEF1-202ENST00000372190 CSF2RBP32927 897 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms