RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZNF593O00488 134 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-201ENST00000371817 TCF21O43680 179 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 OR2J3O76001 311 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 SNRPGP62308 76 aaKnown RBP14.13□□□□□ -0.15
COL5A1-201ENST00000371817 C18orf21Q32NC0 220 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-201ENST00000371817 IER5LQ5T953 404 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 SAXO2Q658L1 398 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 NLGN4XQ8N0W4 816 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 ELOVL1Q9BW60 279 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 GABRQQ9UN88 632 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 SULT2B1O00204 365 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 TACR1P25103 407 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 SERINC2Q96SA4 455 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 DHRS4Q9BTZ2 278 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 GNG12Q9UBI6 72 aa14.13□□□□□ -0.15
COL5A1-201ENST00000371817 A6NDN8 102 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 CALCBP10092 127 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 CLEC12BQ2HXU8 276 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 MAMDC4Q6UXC1 1216 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 LILRA2Q8N149 483 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 OR2G2Q8NGZ5 317 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 FAM234AQ9H0X4 552 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 GPR160Q9UJ42 338 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 KDM4DQ6B0I6 523 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 OR51A2Q8NGJ7 313 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 TMEM37Q8WXS4 190 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ATG101Q9BSB4 218 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF385DQ9H6B1 395 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 A0A087WV62 115 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 PPOXP50336 477 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 OR5I1Q13606 314 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 C9orf131Q5VYM1 1079 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF429Q86V71 674 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ASB11Q8WXH4 323 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 RAB7BQ96AH8 199 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF778Q96MU6 729 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 CHST11Q9NPF2 352 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 PIGAP37287 484 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 SLC10A2Q12908 348 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-201ENST00000371817 OR52N1Q8NH53 320 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 FBXW5Q969U6 566 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ELOA3CA0A087WX78 387 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-201ENST00000371817 M0R2Z0 102 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 RGS13O14921 159 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 LEFTY1O75610 366 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 LGI1O95970 557 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF626Q68DY1 528 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF547Q8IVP9 402 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 SLC39A11Q8N1S5 342 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 PPP1R1CQ8WVI7 109 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 TMEM151BQ8IW70 566 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 OR52R1Q8NGF1 315 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 SLC2A4RGQ9NR83 387 aa14.12□□□□□ -0.15
COL5A1-201ENST00000371817 MAN2B1O00754 1011 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 ACHEP22303 614 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 PSMB2P49721 201 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 NOVA1P51513 510 aaKnown RBP14.11□□□□□ -0.15
COL5A1-201ENST00000371817 OR52I2Q8NH67 350 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 BOCQ9BWV1 1114 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 PARP4Q9UKK3 1724 aaKnown RBP14.11□□□□□ -0.15
COL5A1-201ENST00000371817 NCBP2LA6PVI3 153 aaKnown RBP14.11□□□□□ -0.15
COL5A1-201ENST00000371817 CFIP05156 583 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 SLC6A11P48066 632 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 ALKBH1Q13686 389 aaKnown RBP14.11□□□□□ -0.15
COL5A1-201ENST00000371817 STUMQ69YW2 141 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 WDR73Q6P4I2 378 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 OR2L13Q8N349 312 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 FAM24AA6NFZ4 105 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 KCNJ3P48549 501 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 CD81P60033 236 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 PLPP7Q8NBV4 271 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 MIDNQ504T8 468 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 Q6ZPB1 254 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-201ENST00000371817 ARRDC2Q8TBH0 407 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 VN1R3Q9BXE9 311 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 PIRO00625 290 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF888P0CJ79 500 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-201ENST00000371817 RAD52P43351 418 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 EPHA5P54756 1037 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 TGFBR3Q03167 851 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 ABCA7Q8IZY2 2146 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 GALNT16Q8N428 558 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 OR2A1Q8NGT9 310 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 DOK4Q8TEW6 326 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 FOXN4Q96NZ1 517 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 MYOM1P52179 1685 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 OR7C2O60412 319 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 WDR88Q6ZMY6 472 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 AMDHD1Q96NU7 426 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 NDUFB11Q9NX14 153 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 CLEC2DQ9UHP7 191 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 FZD1Q9UP38 647 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 FIBINQ8TAL6 211 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
COL5A1-201ENST00000371817 SLC22A20A6NK97 555 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 PRAMEF4O60810 478 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SUB1P53999 127 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 LRRC18Q8N456 261 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 MTMR14Q8NCE2 650 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms