RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SNTB2Q13425 540 aaKnown RBP17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 TOP3AQ13472 1001 aaPredicted RBP17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 FAM27BQ5VT28 67 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 ARHGAP24Q8N264 748 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 FNDC8Q8TC99 324 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 SORCS2Q96PQ0 1159 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 MDFIQ99750 246 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 ACTR3BQ9P1U1 418 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 ADAM21Q9UKJ8 722 aa17.71■□□□□ 0.43
SMNDC1-201ENST00000369592 NR2C1P13056 603 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 ATP6V1B2P21281 511 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 CDAP32320 146 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 EVX1P49640 407 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 NUDT6P53370 316 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 DSCR9P59020 149 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 SNRPD2P62316 118 aaKnown RBP17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 ERVK-25P63136 954 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 SLC36A2Q495M3 483 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 KRT80Q6KB66 452 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 VHLLQ6RSH7 139 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 THSD4Q6ZMP0 1018 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 SLC16A14Q7RTX9 510 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 ZER1Q7Z7L7 766 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 PAQR4Q8N4S7 273 aaPredicted RBP17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 Q96M85 177 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 NRIP3Q9NQ35 241 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 ADAM18Q9Y3Q7 739 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 V9GYQ6 96 aa17.7■□□□□ 0.42
SMNDC1-201ENST00000369592 TCRBV5S2A0A599 114 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 AHCYL1O43865 530 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 GPRIN2O60269 458 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 CALB2P22676 271 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 HMGA2P52926 109 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 SMIM11AP58511 58 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 CD47Q08722 323 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 MESTQ5EB52 335 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 FGD3Q5JSP0 725 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 RINLQ6ZS11 566 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 RRM2BQ7LG56 351 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 ZNF525Q8N782 197 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 C10orf105Q8TEF2 133 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 MRPL24Q96A35 216 aaKnown RBP17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 RBP7Q96R05 134 aa17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 FBXO9Q9UK97 447 aaPredicted RBP17.69■□□□□ 0.42
SMNDC1-201ENST00000369592 SLC22A23A1A5C7 686 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 LY6HO94772 140 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 NDUFB2O95178 105 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 SNAP29O95721 258 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 TXNDC12O95881 172 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 MAGEA2P43356 314 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 MS4A2Q01362 244 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 LCN8Q6JVE9 175 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 TMEM53Q6P2H8 277 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 SVOPLQ8N434 492 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 CPEB3Q8NE35 698 aaKnown RBP17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 SLC30A7Q8NEW0 376 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 OR52J3Q8NH60 311 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 RSRC1Q96IZ7 334 aaKnown RBP17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 RHNO1Q9BSD3 238 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 MRPL37Q9BZE1 423 aaKnown RBP17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 C1orf198Q9H425 327 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 SLC7A8Q9UHI5 535 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 CMAHPQ9Y471 501 aa17.68■□□□□ 0.42
SMNDC1-201ENST00000369592 JMJD1CQ15652 2540 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 VWC2LB2RUY7 222 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 GADD45GO95257 159 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 SCG5P05408 212 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 FABP3P05413 133 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 MXRA7P84157 204 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 MTX3Q5HYI7 312 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 CLEC2AQ6UVW9 174 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 LRRC18Q8N456 261 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 MAPK1IP1LQ8NDC0 245 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 NSMAFQ92636 917 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 C1orf21Q9H246 121 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 MUC13Q9H3R2 512 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 TAS2R1Q9NYW7 299 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 SPEF1Q9Y4P9 236 aa17.67■□□□□ 0.42
SMNDC1-201ENST00000369592 PRSS37A4D1T9 235 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 UNC119BA6NIH7 251 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 VSTM5A8MXK1 200 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 CST2P09228 141 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 CSF3P09919 207 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 APEHP13798 732 aaKnown RBP17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 ZNF32P17041 273 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 PCSK6P29122 969 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 GSSP48637 474 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 SPIBQ01892 262 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 ENDOGQ14249 297 aaKnown RBP17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 TRIM25Q14258 630 aaKnown RBP17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 PABPC1L2AQ5JQF8 200 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 GPR139Q6DWJ6 353 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 CYP2R1Q6VVX0 501 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 DPY19L2P2Q6ZN68 376 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 ZDHHC21Q8IVQ6 265 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 VSX1Q9NZR4 365 aaPredicted RBP17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 GRHPRQ9UBQ7 328 aa17.66■□□□□ 0.42
SMNDC1-201ENST00000369592 KIAA1324LA8MWY0 1029 aaPredicted RBP17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 H7C1C5 153 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 PTHP01270 115 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms