RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 LIMS3P0CW19 117 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 LIMS4P0CW20 117 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 SLC2A5P22732 501 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 AHCYP23526 432 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 GDF1P27539 372 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 APOBEC1P41238 236 aaKnown RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 CLK1P49759 484 aaKnown RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 RPS3AP61247 264 aaKnown RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 LCN6P62502 163 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 SORDQ00796 357 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 OR7A5Q15622 319 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 SSX1Q16384 188 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 PLPPR5Q32ZL2 321 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 FAM69AQ5T7M9 428 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 RNLSQ5VYX0 342 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 Q71RC1 249 aaPredicted RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 ADGRE4PQ86SQ3 457 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 CXorf67Q86X51 503 aaPredicted RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 ALDH16A1Q8IZ83 802 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 WDSUB1Q8N9V3 476 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 OR10H4Q8NGA5 316 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 ZNF417Q8TAU3 575 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 POC1BQ8TC44 478 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 STK35Q8TDR2 534 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 ZMYND19Q96E35 227 aaPredicted RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 ARL5BQ96KC2 179 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 C18orf12Q96KH6 178 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 TSPAN32Q96QS1 320 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 GPX7Q96SL4 187 aaPredicted RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 ZNF587Q96SQ5 575 aaPredicted RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 TEAD3Q99594 435 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 CHCHD6Q9BRQ6 235 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 RNF167Q9H6Y7 350 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 TMEM185BQ9H7F4 350 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 GRHPRQ9UBQ7 328 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 EDARQ9UNE0 448 aa8.85□□□□□ -0.99
TPM3-210ENST00000368530 SPIN1Q9Y657 262 aaPredicted RBP8.85□□□□□ -0.99
TPM3-210ENST00000368530 IGLV3-32A0A0A0MS00 114 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 TMEM129A0AVI4 362 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 OR6C68A6NDL8 312 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 TRIM64BA6NI03 449 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 C12orf71A8MTZ7 269 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 M0R3G1 203 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 CCRL2O00421 344 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 ARPC3O15145 178 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 IDH3BO43837 385 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 AHCYL1O43865 530 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 SNX4O95219 450 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 OR6A2O95222 327 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 IL18BPO95998 194 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 MT-ATP6P00846 226 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 IGHA1P01876 353 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 CTSSP25774 331 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 GTF2E2P29084 291 aaKnown RBP8.84□□□□□ -0.99
TPM3-210ENST00000368530 PYCR1P32322 319 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 CDKN2AP42771 156 aaKnown RBP8.84□□□□□ -0.99
TPM3-210ENST00000368530 WNT4P56705 351 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 FOXF2Q12947 444 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 KRR1Q13601 381 aaKnown RBP8.84□□□□□ -0.99
TPM3-210ENST00000368530 LIPKQ5VXJ0 399 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 PLCZ1Q86YW0 608 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 PM20D2Q8IYS1 436 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 KLHL36Q8N4N3 616 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 ZFP41Q8N8Y5 198 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 FADS6Q8N9I5 356 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 C9orf106Q8NAJ2 232 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 NPEPL1Q8NDH3 523 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 OR5J2Q8NH18 312 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 ZNRF4Q8WWF5 429 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 SMPDL3BQ92485 455 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 DDIT4LQ96D03 193 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 C1GALT1C1Q96EU7 318 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 ASPNQ9BXN1 380 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 TTTY10Q9BZA0 68 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 RACGAP1Q9H0H5 632 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 PTGES2Q9H7Z7 377 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 CALHM2Q9HA72 323 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 EXOSC4Q9NPD3 245 aaKnown RBP8.84□□□□□ -0.99
TPM3-210ENST00000368530 RPRD1BQ9NQG5 326 aaKnown RBP8.84□□□□□ -0.99
TPM3-210ENST00000368530 ASB6Q9NWX5 421 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 ERVK13-1Q9NX77 482 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 TAS2R5Q9NYW4 299 aa8.84□□□□□ -0.99
TPM3-210ENST00000368530 ZNF346Q9UL40 294 aaKnown RBP8.84□□□□□ -0.99
TPM3-210ENST00000368530 DAPL1A0PJW8 107 aa8.83□□□□□ -1
TPM3-210ENST00000368530 SLC22A1O15245 554 aa8.83□□□□□ -1
TPM3-210ENST00000368530 EFNA2O43921 213 aa8.83□□□□□ -1
TPM3-210ENST00000368530 TRAPPC6AO75865 159 aa8.83□□□□□ -1
TPM3-210ENST00000368530 GOSR1O95249 250 aa8.83□□□□□ -1
TPM3-210ENST00000368530 SCG5P05408 212 aa8.83□□□□□ -1
TPM3-210ENST00000368530 INHBBP09529 407 aa8.83□□□□□ -1
TPM3-210ENST00000368530 TSPAN19P0C672 248 aa8.83□□□□□ -1
TPM3-210ENST00000368530 CPN1P15169 458 aa8.83□□□□□ -1
TPM3-210ENST00000368530 SPI1P17947 270 aa8.83□□□□□ -1
TPM3-210ENST00000368530 SDHAP31040 664 aa8.83□□□□□ -1
TPM3-210ENST00000368530 IDUAP35475 653 aa8.83□□□□□ -1
TPM3-210ENST00000368530 NAA10P41227 235 aaPredicted RBP8.83□□□□□ -1
TPM3-210ENST00000368530 HCCSP53701 268 aa8.83□□□□□ -1
TPM3-210ENST00000368530 LGALS3BPQ08380 585 aa8.83□□□□□ -1
TPM3-210ENST00000368530 MLLT11Q13015 90 aaPredicted RBP8.83□□□□□ -1
TPM3-210ENST00000368530 SNTA1Q13424 505 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms