RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ZNF584Q8IVC4 421 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 LRRC75A-AS1Q8N1F1 130 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 PAPD5Q8NDF8 572 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 SAMD8Q96LT4 415 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 GRIP2Q9C0E4 1043 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 ZNF701Q9NV72 531 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 F8P00451 2351 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 SOCS2O14508 198 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 XKRYO14609 159 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 AHCYL1O43865 530 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 TMCC2O75069 709 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 ENTPD5O75356 428 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 FARS2O95363 451 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 MMP7P09237 267 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 APEHP13798 732 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 ADAM8P78325 824 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 C11orf71Q6IPW1 123 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 TMEM179BQ7Z7N9 219 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 LRRC18Q8N456 261 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 GSX2Q9BZM3 304 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 MMADHCQ9H3L0 296 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 SIAEQ9HAT2 523 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 HIVEP1P15822 2718 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 MAP1AP78559 2803 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 ARPC3O15145 178 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 CTLA4P16410 223 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 NPR2P20594 1047 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 SLC6A6P31641 620 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 CDKN2AP42771 156 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 PTH2RP49190 550 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 RPS6KA3P51812 740 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 RAB39AQ14964 217 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 ZNF544Q6NX49 715 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 SLC16A14Q7RTX9 510 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 AQP11Q8NBQ7 271 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 PERPQ96FX8 193 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 ERMAPQ96PL5 475 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 KCNS3Q9BQ31 491 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 CXorf56Q9H5V9 222 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 EGLN3Q9H6Z9 239 aa19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 VSX1Q9NZR4 365 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-203ENST00000368291 MGRN1O60291 552 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 FKBP6O75344 327 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 RAB36O95755 333 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 SERPINA5P05154 406 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 SCG5P05408 212 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 ZNF35P13682 527 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 HOXB6P17509 224 aaKnown RBP19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 FABP6P51161 128 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 NKX6-1P78426 367 aaPredicted RBP19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 SGCAQ16586 387 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 FAM27BQ5VT28 67 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 ASRGL1Q7L266 308 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 ADCK1Q86TW2 530 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 MUC15Q8N387 334 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 IL17RDQ8NFM7 739 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 GTPBP3Q969Y2 492 aaKnown RBP19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 FBXO17Q96EF6 278 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 DGCR6LQ9BY27 220 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 PLA2G12AQ9BZM1 189 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 SYT4Q9H2B2 425 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 FAIMQ9NVQ4 179 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 IL20Q9NYY1 176 aa19.43■□□□□ 0.7
ECHDC1-203ENST00000368291 TP53P04637 393 aaPredicted RBP19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 APOBEC3AP31941 199 aaPredicted RBP19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 CDKN1AP38936 164 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 CBX1P83916 185 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 GK3PQ14409 553 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 SLC36A2Q495M3 483 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 AGAP6Q5VW22 663 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 RASSF6Q6ZTQ3 369 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 DPPA2Q7Z7J5 298 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 WFDC11Q8NEX6 87 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 NUP37Q8NFH4 326 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 OR4F15Q8NGB8 312 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 OR8D4Q8NGM9 314 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 IFT27Q9BW83 186 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 CA10Q9NS85 328 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 CBLN4Q9NTU7 201 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 CDH10Q9Y6N8 788 aa19.42■□□□□ 0.7
ECHDC1-203ENST00000368291 CHD3Q12873 2000 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 A0A1W2PPL8 197 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 IGFBP1P08833 259 aaPredicted RBP19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 HIST1H1CP16403 213 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 LAP3P28838 519 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 ENDOGQ14249 297 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 MST1LQ2TV78 715 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 TGIF2LYQ8IUE0 185 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 FBXL14Q8N1E6 418 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 OR10G2Q8NGC3 310 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 UTP4Q969X6 686 aaKnown RBP19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 NIPSNAP1Q9BPW8 284 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 RNF121Q9H920 327 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 FBXL3Q9UKT7 428 aa19.41■□□□□ 0.7
ECHDC1-203ENST00000368291 DCTN6O00399 190 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 BHLHE40O14503 412 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 ZNF32P17041 273 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 DBPQ10586 325 aaPredicted RBP19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 TMEM53Q6P2H8 277 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 GIPC3Q8TF64 312 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms