RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GTPBP8Q8N3Z3 284 aaPredicted RBP2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 CEP112Q8N8E3 955 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 Q8N976 141 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 OR10R2Q8NGX6 335 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF596Q8TC21 504 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC7A13Q8TCU3 470 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 CD300LFQ8TDQ1 290 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ACMSDQ8TDX5 336 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ZFP90Q8TF47 636 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 MRPL37Q9BZE1 423 aaKnown RBP2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 RACGAP1Q9H0H5 632 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 IFI27L2Q9H2X8 130 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 TPK1Q9H3S4 243 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ING4Q9UNL4 249 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 PSG8Q9UQ74 426 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ST3GAL6Q9Y274 331 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 NUP214P35658 2090 aaPredicted RBP2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 IGLV4-60A0A075B6I1 120 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 IGKV6-21A0A0C4DH24 114 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 SMCO2A6NFE2 343 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 H0YHG0 523 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 XKRYO14609 159 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 MRPS12O15235 138 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 DPM1O60762 260 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 EEDO75530 441 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 OR2J3O76001 311 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF250P15622 560 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 MAGP20916 626 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 AK4P27144 223 aaPredicted RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 RPS9P46781 194 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 RND2P52198 227 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 UGT2B15P54855 530 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 LINC00315P59091 139 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 ECH1Q13011 328 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 PTGES3Q15185 160 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 COA6Q5JTJ3 125 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 DUX4L9Q6RFH8 374 aaPredicted RBP2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 Q6ZR03 302 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF493Q6ZR52 646 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 STRADAQ7RTN6 431 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 MREGQ8N565 214 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 SPATA4Q8NEY3 305 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 RHEBL1Q8TAI7 183 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF502Q8TBZ5 544 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 GPR151Q8TDV0 419 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 STMN2Q93045 179 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 CCDC126Q96EE4 140 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 PKNOX2Q96KN3 472 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 TSSK3Q96PN8 268 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 OR5B12Q96R08 314 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 P2RX4Q99571 388 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 ECSITQ9BQ95 431 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC40A1Q9NP59 571 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 KCNJ16Q9NPI9 418 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 DCAF16Q9NXF7 216 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 TBX21Q9UL17 535 aa2.09□□□□□ -2.07
ECHDC1-201ENST00000368287 MN1Q10571 1320 aaPredicted RBP2.09□□□□□ -2.08
ECHDC1-201ENST00000368287 NSD2O96028 1365 aa2.09□□□□□ -2.08
ECHDC1-201ENST00000368287 CTAGE15A4D2H0 777 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 CCDC169A6NNP5 214 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 DNALI1O14645 258 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 CLOCKO15516 846 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 ANGPTL7O43827 346 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF324O75467 553 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 WISP3O95389 354 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 SERPINA5P05154 406 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 ZDHHC11BP0C7U3 371 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 SMIM10L1P0DMW3 83 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PRPS2P11908 318 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 SSR4P51571 173 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 MXD1Q05195 221 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 SELENBP1Q13228 472 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 CUL2Q13617 745 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PPP1R7Q15435 360 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 POU2AF1Q16633 256 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PPM1LQ5SGD2 360 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 CTAGE6Q86UF2 777 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PCP2Q8IVA1 136 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 OR7G2Q8NG99 324 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 CXorf40AQ8TE69 158 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PIBF1Q8WXW3 757 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 EXOSC8Q96B26 276 aaKnown RBP2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 FAM3DQ96BQ1 224 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PIK3IP1Q96FE7 263 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 SMIM10Q96HG1 83 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 COL21A1Q96P44 957 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 SH3GL3Q99963 347 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 CHAC1Q9BUX1 264 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 ILKAPQ9H0C8 392 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PTTG3PQ9NZH4 202 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 PITPNC1Q9UKF7 332 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 VANGL2Q9ULK5 521 aa2.08□□□□□ -2.08
ECHDC1-201ENST00000368287 IGLV11-55A0A075B6I3 123 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 A0A0B4J2A0 478 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 GLYATL1P3A0A0U1RQE8 302 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 A0A1B0GVX0 72 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 CDC7O00311 574 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 LSM1O15116 133 aaKnown RBP2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 SRP72O76094 671 aaKnown RBP2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 FABP3P05413 133 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms