RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SERTAD2Q14140 314 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 EIF2B1Q14232 305 aaKnown RBP11.15□□□□□ -0.63
PTPN7-202ENST00000367279 ACKR1Q16570 336 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 VWA2Q5GFL6 755 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 THAP3Q8WTV1 239 aaPredicted RBP11.15□□□□□ -0.63
PTPN7-202ENST00000367279 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 LCORQ96JN0 433 aaPredicted RBP11.15□□□□□ -0.63
PTPN7-202ENST00000367279 CLEC1BQ9P126 229 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 CKLFQ9UBR5 152 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 MTFP1Q9UDX5 166 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 GMEB2Q9UKD1 530 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 ATXN7L1Q9ULK2 861 aaPredicted RBP11.15□□□□□ -0.63
PTPN7-202ENST00000367279 SESN1Q9Y6P5 492 aa11.15□□□□□ -0.63
PTPN7-202ENST00000367279 TRBV5-5A0A0J9YX44 114 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 PLSCR5A0PG75 271 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 IL33O95760 270 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 CSF1P09603 554 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 S100A11P31949 105 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 DNASE1L1P49184 302 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 H2BFSP57053 126 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 SLC37A1P57057 533 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 PLCXD2Q0VAA5 305 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 ATXN7L3Q14CW9 347 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-202ENST00000367279 NKPD1Q17RQ9 610 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 ISXQ2M1V0 245 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 TMEM205Q6UW68 189 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 TMUB2Q71RG4 321 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 EXD3Q8N9H8 876 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 CENPMQ9NSP4 180 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 SDHAF2Q9NX18 166 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 TAS2R4Q9NYW5 299 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 FBXL2Q9UKC9 423 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 LOC105371267A0A1B0GV96 52 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 ZNF432O94892 652 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 PNPP00491 289 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 AMY2AP04746 511 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 BTN1A1Q13410 526 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 GLYATL3Q5SZD4 288 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 EEF1A1P5Q5VTE0 462 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 B3GNTL1Q67FW5 361 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-202ENST00000367279 LINC00346Q8IVM7 164 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 SPICQ8N5J4 248 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 OR2AK2Q8NG84 335 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 MRTO4Q9UKD2 239 aaKnown RBP11.14□□□□□ -0.63
PTPN7-202ENST00000367279 RNF215Q9Y6U7 377 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 PCDH15Q96QU1 1955 aa11.14□□□□□ -0.63
PTPN7-202ENST00000367279 CABIN1Q9Y6J0 2220 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 TEX51A0A1B0GUA7 166 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 PPICP45877 212 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 CAPZBP47756 277 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MFGE8Q08431 387 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 ZMYND11Q15326 602 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 NSDHLQ15738 373 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 SLC18B1Q6NT16 456 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 STEAP1BQ6NZ63 245 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MAMDC2Q7Z304 686 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MED11Q9P086 117 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 PFDN2Q9UHV9 154 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 FAM25EA8MYX2 175 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 LDOC1O95751 146 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 CD2P06729 351 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 PTGS2P35354 604 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 GMFBP60983 142 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 SLC17A1Q14916 467 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 C17orf107Q6ZR85 190 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 BPHLQ86WA6 291 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 ARHGEF39Q8N4T4 335 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 SLC25A44Q96H78 314 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 NUDT9Q9BW91 350 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 POFUT1Q9H488 388 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MSRAQ9UJ68 235 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 EMC9Q9Y3B6 208 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 SNRPGP15A8MWD9 76 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 RAB3DO95716 219 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 WNT11O96014 354 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 CLPSP04118 112 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 CPN1P15169 458 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 MAP2K6P52564 334 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 IGLV3-21P80748 117 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 EGR3Q06889 387 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 SMAD2Q15796 467 aaKnown RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 C16orf47Q6ZP98 133 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 CHST4Q8NCG5 386 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 PDCD10Q9BUL8 212 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 CUTCQ9NTM9 273 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 TAS2R8Q9NYW2 309 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 FBXO4Q9UKT5 387 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 COA3Q9Y2R0 106 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-202ENST00000367279 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
PTPN7-202ENST00000367279 THADAQ6YHU6 1953 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms