RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PGAP2Q9UHJ9 254 aa-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 ZNF490Q9ULM2 529 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 PCDHGB4Q9UN71 923 aa-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 KLK5Q9Y337 293 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 USP9YO00507 2555 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 EP300Q09472 2414 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 KIAA2026Q5HYC2 2103 aa-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 LPAP08519 4548 aa-0.77□□□□□ -2.53
RNU6-54P-201ENST00000365563 LRP1BQ9NZR2 4599 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 RPRD2Q5VT52 1461 aaKnown RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGHV2-70DA0A0C4DH43 119 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 C13orf42A0A1B0GVH6 325 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 FNDC10F2Z333 226 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 LOC110117498-PIK3R3F6TDL0 507 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 F8VP50 259 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CACNB4O00305 520 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 DOK2O60496 412 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 SCN2BO60939 215 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 TM7SF2O76062 418 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC22A5O76082 557 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 ETHE1O95571 254 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 GGPS1O95749 300 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 AGR2O95994 175 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 NPPAP01160 153 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGHV1-46P01743 117 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 KRT8P05787 483 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCDC175P0C221 793 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 ANXA3P12429 323 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCDC130P13994 396 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 XRCC1P18887 633 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CYP2B6P20813 491 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 IMPDH1P20839 514 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 LOXP28300 417 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 NPBWR2P48146 333 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCZ1BP86790 482 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCZ1P86791 482 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CD164Q04900 197 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CUL1Q13616 776 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC15A2Q16348 729 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 KLHL38Q2WGJ6 581 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 KRBOX4Q5JUW0 171 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 GPR139Q6DWJ6 353 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 LCA10Q71F78 164 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 TPRA1Q86W33 373 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 AMZ2Q86W34 360 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 TGIF2LXQ8IUE1 241 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 ARFGAP2Q8N6H7 521 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 STKLD1Q8NE28 680 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 OR11H7Q8NGC8 314 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 OR4K14Q8NGD5 310 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 PDCD6IPQ8WUM4 868 aaKnown RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 MR1Q95460 341 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 RAD51AP1Q96B01 352 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 UPRTQ96BW1 309 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 ERO1AQ96HE7 468 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 B9D2Q9BPU9 175 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC35A5Q9BS91 424 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 NAA11Q9BSU3 229 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 MLPHQ9BV36 600 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 OSBPL8Q9BZF1 889 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 TRPV6Q9H1D0 765 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 DPH5Q9H2P9 285 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 PRORYQ9H606 182 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 RNF167Q9H6Y7 350 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 TDRD3Q9H7E2 651 aaKnown RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 WDR76Q9H967 626 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 MRPL47Q9HD33 250 aaKnown RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 PFDN4Q9NQP4 134 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 AGPAT4Q9NRZ5 378 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 MED9Q9NWA0 146 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 CALYQ9NYX4 217 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 NFKBIL1Q9UBC1 381 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 KIAA1257Q9ULG3 409 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 STAP1Q9ULZ2 295 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 COPS3Q9UNS2 423 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 RPL36Q9Y3U8 105 aaKnown RBP-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC22A7Q9Y694 548 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 DYSFO75923 2080 aa-0.78□□□□□ -2.53
RNU6-54P-201ENST00000365563 VWA8A3KMH1 1905 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 BAZ2AQ9UIF9 1905 aaKnown RBP-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 IGLV3-9A0A075B6K5 115 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 IGHV3-72A0A0B4J1Y9 119 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 A0A1B0GTI1 187 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 A0A1W2PPM0 123 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 OR5H1A6NKK0 313 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 VSTM2BA6NLU5 285 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 WASHC1A8K0Z3 465 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 ODF3BA8MYP8 253 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 H3BQ85 93 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 SLC30A4O14863 429 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 ST8SIA3O43173 380 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 SH3BP5O60239 455 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 DPM1O60762 260 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 ATP6V1G1O75348 118 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 KCNK2O95069 426 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 CTRB1P17538 263 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 AHCYP23526 432 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 MAPK3P27361 379 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 MPIP34949 423 aa-0.79□□□□□ -2.54
RNU6-54P-201ENST00000365563 ACADVLP49748 655 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms