RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 NARFQ9UHQ1 456 aa-1.34□□□□□ -2.62
RNU6-340P-201ENST00000364005 PACSIN2Q9UNF0 486 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-340P-201ENST00000364005 TMEM5Q9Y2B1 443 aa-1.34□□□□□ -2.62
RNU6-340P-201ENST00000364005 OARD1Q9Y530 152 aa-1.34□□□□□ -2.62
RNU6-340P-201ENST00000364005 FAM169AQ9Y6X4 670 aa-1.34□□□□□ -2.62
RNU6-340P-201ENST00000364005 BRWD1Q9NSI6 2320 aa-1.34□□□□□ -2.62
RNU6-340P-201ENST00000364005 DENND4BO75064 1496 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 BAZ1BQ9UIG0 1483 aaKnown RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 KIAA1549Q9HCM3 1950 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 IGKV1D-13A0A0B4J2D9 117 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 A0A1B0GU33 70 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 OR5H1A6NKK0 313 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 HIP1O00291 1037 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 EIF1BO60739 113 aaKnown RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 NME6O75414 186 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 PGM3O95394 542 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 AGR2O95994 175 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 IGHV3-11P01762 117 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 IGKV1-13P0DP09 117 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 CLUP10909 449 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 PORP16435 677 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 IMPDH1P20839 514 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 CNTFRP26992 372 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 SOAT1P35610 550 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 EIF1P41567 113 aaKnown RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 HTR5AP47898 357 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 CCR8P51685 355 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 PLP1P60201 277 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 HERVK_113P63132 956 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 ERVK-8P63133 956 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 MPP1Q00013 466 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 RUNX1Q01196 453 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 RIPPLY1Q0D2K3 151 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 LRIT3Q3SXY7 679 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 LUZP6Q538Z0 58 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 MMS22LQ6ZRQ5 1243 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 LANCL3Q6ZV70 420 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 HDDC2Q7Z4H3 204 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 GOLGA7Q7Z5G4 137 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 NUP93Q8N1F7 819 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 Q8NAQ8 132 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 OR4D9Q8NGE8 314 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 LKAAEAR1Q8TD35 194 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 TBATAQ96M53 351 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 NDUFAF3Q9BU61 184 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 GGTLC1Q9BX51 225 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 ERVK-6Q9BXR3 956 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 SLC19A3Q9BZV2 496 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 NAPBQ9H115 298 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 GHITMQ9H3K2 345 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 SMYD3Q9H7B4 428 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 FAM49BQ9NUQ9 324 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 TMOD2Q9NZR1 351 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 PSORS1C2Q9UIG4 136 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 MRPS18BQ9Y676 258 aaKnown RBP-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 NPC1L1Q9UHC9 1359 aa-1.35□□□□□ -2.63
RNU6-340P-201ENST00000364005 HIVEP1P15822 2718 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 RAD54L2Q9Y4B4 1467 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 ALMS1Q8TCU4 4167 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 IGLV3-9A0A075B6K5 115 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 IGHV2-70DA0A0C4DH43 119 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 A0A1B0GTI1 187 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 A0A1B0GUS0 222 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 CLRN2A0PK11 232 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 TMEM89A2RUT3 159 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 FAM74A7A6NL05 159 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 TIMM44O43615 452 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 DPM1O60762 260 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 SIX3O95343 332 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 LDHAP00338 332 aaKnown RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 PAHP00439 452 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 NPPAP01160 153 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 IGHV3-53P01767 116 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 PAICSP22234 425 aaKnown RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 ACTN2P35609 894 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 BDKRB1P46663 353 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 HCAR3P49019 387 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 TCP10Q12799 353 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 BTN1A1Q13410 526 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 BTG3Q14201 252 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 TPRXLQ17RH7 258 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 MICBQ29980 383 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 FAM74A3Q4VXF1 159 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 SOHLH1Q5JUK2 328 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 CCDC158Q5M9N0 1113 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 ERMARDQ5T6L9 678 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 METTL21CQ5VZV1 264 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 CNIH2Q6PI25 160 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 FBXW12Q6X9E4 464 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 APTXQ7Z2E3 356 aaKnown RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 C16orf62Q7Z3J2 963 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 BNIPLQ7Z465 357 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 C15orf54Q8N8G6 183 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 OR5C1Q8NGR4 320 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 DNASE1L2Q92874 299 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 CNDP2Q96KP4 475 aaKnown RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 TRIB3Q96RU7 358 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 PRRT1Q99946 306 aa-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 MRPL45Q9BRJ2 306 aaKnown RBP-1.36□□□□□ -2.63
RNU6-340P-201ENST00000364005 NAA11Q9BSU3 229 aaPredicted RBP-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms