RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 UTS2O95399 124 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 AIFM1O95831 613 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 IGLV2-23P01705 113 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZDHHC11BP0C7U3 371 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 DUX4L4P0CJ87 422 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 PNMA6AP0CW24 399 aaPredicted RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 GSTM3P21266 225 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 BCKDHBP21953 392 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 HRH1P35367 487 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CSNK1EP49674 416 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 LHX2P50458 406 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 NUTF2P61970 127 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 SLC25A11Q02978 314 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CKAP4Q07065 602 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 SPAG1Q07617 926 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 TWF1Q12792 350 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 ILKQ13418 452 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 PSG5Q15238 335 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 SF3A2Q15428 464 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 MPPED2Q15777 294 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 TTC23LQ6PF05 361 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 LINC00173Q6ZV60 143 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 OTUD6AQ7L8S5 288 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 C6orf120Q7Z4R8 191 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 KATNAL2Q8IYT4 538 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CMTM1Q8IZ96 169 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CCDC54Q8NEL0 328 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 MARCH1Q8TCQ1 289 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 LKAAEAR1Q8TD35 194 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 ACTRT1Q8TDG2 376 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 RNF185Q96GF1 192 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 FAM210BQ96KR6 192 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 XPO6Q96QU8 1125 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 MRPL37Q9BZE1 423 aaKnown RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 LINC00597Q9H2U6 94 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 ELOVL6Q9H5J4 265 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 NTN4Q9HB63 628 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 DMAP1Q9NPF5 467 aaPredicted RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CLN8Q9UBY8 286 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 PCYOX1Q9UHG3 505 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CELA1Q9UNI1 258 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 CACNG2Q9Y698 323 aa2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 COL22A1Q8NFW1 1626 aaPredicted RBP2.5□□□□□ -2.01
RNU6-28P-201ENST00000362378 PLEKHG2Q9H7P9 1386 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 IGHV3-64DA0A0J9YX35 117 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 PLAC8L1A1L4L8 177 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SPECC1L-ADORA2AF8WAN1 911 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 H0YHG0 523 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 LAD1O00515 517 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 DPM1O60762 260 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SUPT3HO75486 399 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 CLDN11O75508 207 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SRP72O76094 671 aaKnown RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SERPINE2P07093 398 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 STAG3L3P0CL85 134 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 NR2C1P13056 603 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZNF30P17039 623 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 HMOX2P30519 316 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 GPX4P36969 197 aaPredicted RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 RPS5P46782 204 aaKnown RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 NMUP48645 174 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 NCBP2P52298 156 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 CRISP3P54108 245 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 MXD1Q05195 221 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 ITIH4Q14624 930 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 PON3Q15166 354 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 TTLL9Q3SXZ7 439 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 C2orf83Q53S99 150 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SPECC1LQ69YQ0 1117 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 TWF2Q6IBS0 349 aaKnown RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 LYPD2Q6UXB3 125 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 TEX43Q6ZNM6 134 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 TMCO2Q7Z6W1 182 aaPredicted RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZNF429Q86V71 674 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 MICU2Q8IYU8 434 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 RNF175Q8N4F7 328 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 MREGQ8N565 214 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR5B3Q8NH48 314 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 LYPD6BQ8NI32 183 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 CD300LFQ8TDQ1 290 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 CAPSLQ8WWF8 208 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 DNAJC19Q96DA6 116 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 ASB9Q96DX5 294 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 PRRC1Q96M27 445 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SERPINB12Q96P63 405 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 IQCGQ9H095 443 aaKnown RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 SLCO1B3Q9NPD5 702 aa2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 CCDC59Q9P031 241 aaKnown RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 PDP1Q9P0J1 537 aaPredicted RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 STOX2Q9P2F5 926 aaPredicted RBP2.49□□□□□ -2.01
RNU6-28P-201ENST00000362378 A0A1B0GTQ1 180 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 LYRM9A8MSI8 78 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 FAM166BA8MTA8 275 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 H0Y9J4 135 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 GOLGA8TH3BQL2 631 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 L7N2F9 121 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 SCAMP2O15127 329 aaKnown RBP2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 FGFR1OPO95684 399 aaKnown RBP2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 ACSM4P0C7M7 580 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CT45A6P0DMU7 189 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms