RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 C9orf135Q5VTT2 229 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 C12orf73Q69YU5 71 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC22A24Q8N4F4 322 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 IQCF1Q8N6M8 205 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC37A3Q8NCC5 494 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 HRASLS5Q96KN8 279 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 NMNAT2Q9BZQ4 307 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 KCNN2Q9H2S1 579 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 RIBC2Q9H4K1 309 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 SMPD3Q9NY59 655 aaPredicted RBP12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 NKX1-2Q9UD57 310 aaPredicted RBP12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 FBXL3Q9UKT7 428 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 B9D1Q9UPM9 204 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 MOKQ9UQ07 419 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 UGT2A1Q9Y4X1 527 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC25A15Q9Y619 301 aa12.11□□□□□ -0.47
NSMCE1-201ENST00000361439 IGLV1-36A0A0B4J1U3 117 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 H0YJX3 145 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 UBL3O95164 117 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 HRGP04196 525 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 B4GALT1P15291 398 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 CRYGSP22914 178 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 PEX2P28328 305 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 EPHA2P29317 976 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 PCBD1P61457 104 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 EFNB1P98172 346 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 CRMP1Q14194 572 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 SYT9Q86SS6 491 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 LINC01560Q8TB33 94 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 NSMAFQ92636 917 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 TOR3AQ9H497 397 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 TVP23BQ9NYZ1 205 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 CRIM1Q9NZV1 1036 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 KCNG2Q9UJ96 466 aa12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 NDRG4Q9ULP0 352 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-201ENST00000361439 A0A096LPE4 126 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 PRR23D1E9PI22 279 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC16A6O15403 523 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 PRODHO43272 600 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 THBDP07204 575 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 CST2P09228 141 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 PRR23D2P0DMB1 279 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 MSR1P21757 451 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 ARR3P36575 388 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 NR1H2P55055 460 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 HSF2Q03933 536 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 TSC22D1Q15714 1073 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC36A2Q495M3 483 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC35D3Q5M8T2 416 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 TMEM236Q5W0B7 351 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 CYB561A3Q8NBI2 242 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 OR8J1Q8NGP2 316 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 PITX2Q99697 317 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 SEC61A2Q9H9S3 476 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 SRA1Q9HD15 236 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 POLE4Q9NR33 117 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 B3GNT2Q9NY97 397 aa12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 CRNNQ9UBG3 495 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 COA3Q9Y2R0 106 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-201ENST00000361439 DCTN6O00399 190 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 MPZL2O60487 215 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 IGKV3-15P01624 115 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 CBR1P16152 277 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 SPI1P17947 270 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 GGT2P36268 569 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 POLR2IP36954 125 aaKnown RBP12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 KEAP1Q14145 624 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 ETFDHQ16134 617 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 LRRC36Q1X8D7 754 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 BEX5Q5H9J7 111 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 SLC25A30Q5SVS4 291 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 TTC23Q5W5X9 447 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 C22orf34Q6ZV56 151 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 SLC16A14Q7RTX9 510 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 SKA3Q8IX90 412 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 GALNT4Q8N4A0 578 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 ZNF555Q8NEP9 628 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 PROKR2Q8NFJ6 384 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 OR52N5Q8NH56 324 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 TMEM163Q8TC26 289 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 PTP4A1Q93096 173 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 C14orf79Q96F83 325 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 TSSK2Q96PF2 358 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 MBOAT4Q96T53 435 aa12.08□□□□□ -0.48
NSMCE1-201ENST00000361439 ESRP2Q9H6T0 727 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms