RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FYTTD1Q96QD9 318 aaKnown RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 C1QTNF6Q9BXI9 259 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 DHCR7Q9UBM7 475 aaKnown RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 RNF150Q9ULK6 438 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 A0A0A6YYJ9 748 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 ATP1B1P05026 303 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF865P0CJ78 1059 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 Q6ZRG5 221 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF596Q8TC21 504 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 APH1BQ8WW43 257 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 SLC16A6O15403 523 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 OR10A3P58181 314 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 GPR85P60893 370 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 FAM74A1Q5RGS3 127 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 TMEM268Q5VZI3 342 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 DPY19L2P2Q6ZN68 376 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF595Q8IYB9 648 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 UTP23Q9BRU9 249 aaKnown RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 RAD52P43351 418 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 CDH26Q8IXH8 852 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 LSMEM2Q8N112 164 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 C11orf42Q8N5U0 333 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 CHST2Q9Y4C5 530 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 PNPP00491 289 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 SNTB1Q13884 538 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 VRK3Q8IV63 474 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 LGI3Q8N145 548 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZBTB44Q8NCP5 570 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 BARX1Q9HBU1 254 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF814B7Z6K7 855 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF587BE7ETH6 402 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 YIF1AO95070 293 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 IAPPP10997 89 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 NDUFB7P17568 137 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 TBPP20226 339 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 DUSP1P28562 367 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 RAC1P63000 192 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 MLF2Q15773 248 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 SPANXN5Q5MJ07 72 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 GDPD3Q7L5L3 318 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 RPUSD4Q96CM3 377 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ACOXLQ9NUZ1 547 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 OBP2AQ9NY56 170 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 LHX3Q9UBR4 397 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZMAT5Q9UDW3 170 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 NTNG1Q9Y2I2 539 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 RPL13AP40429 203 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 DCAF7P61962 342 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 RBPJQ06330 500 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 PRDX1Q06830 199 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 Q1RN00 199 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 LRRTM1Q86UE6 522 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF583Q96ND8 569 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF251Q9BRH9 671 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 TWSG1Q9GZX9 223 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 KLK4Q9Y5K2 254 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 TO15178 435 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 PTBP3O95758 552 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ATXN1LP0C7T5 689 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 MTHFD2P13995 350 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF133P52736 654 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 MPPED2Q15777 294 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 CNTN4Q8IWV2 1026 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ST8SIA4Q92187 359 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 PINX1Q96BK5 328 aaKnown RBP14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ZIC5Q96T25 663 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 SOX7Q9BT81 388 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 GLIPR2Q9H4G4 154 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 DCAF16Q9NXF7 216 aa14.75□□□□□ -0.05
COL18A1-203ENST00000359759 ADRB1P08588 477 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 DDOSTP39656 456 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 OR1M1Q8NGA1 313 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 TM4SF18Q96CE8 201 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 DNMT3BQ9UBC3 853 aaKnown RBP14.74□□□□□ -0.05
COL18A1-203ENST00000359759 AKR7A3O95154 331 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 NKX2-1P43699 371 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-203ENST00000359759 SUMO1P63165 101 aaKnown RBP14.74□□□□□ -0.05
COL18A1-203ENST00000359759 LRRC26Q2I0M4 334 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 NUDT8Q8WV74 236 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 SLC7A6Q92536 515 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 ISG20Q96AZ6 181 aaKnown RBP14.74□□□□□ -0.05
COL18A1-203ENST00000359759 PARP4Q9UKK3 1724 aaKnown RBP14.74□□□□□ -0.05
COL18A1-203ENST00000359759 ALOX5APP20292 161 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 MAP2K6P52564 334 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 TBC1D28Q2M2D7 210 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF620Q6ZNG0 422 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 OR1J2Q8NGS2 313 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 OR52I2Q8NH67 350 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 KIRREL1Q96J84 757 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 SLC46A2Q9BY10 475 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 PLEKHF2Q9H8W4 249 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 A4GALTQ9NPC4 353 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 KPTNQ9Y664 436 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 SLC5A10A0PJK1 596 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 OR2A25A4D2G3 310 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 ANKRD61A6NGH8 418 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 PRAMEF25A6NGN4 478 aa14.74□□□□□ -0.05
COL18A1-203ENST00000359759 NME1P15531 152 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms