RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 EIF1P41567 113 aaKnown RBP16.89■□□□□ 0.29
SHANK1-202ENST00000359082 FABP6P51161 128 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 PRTGQ2VWP7 1150 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 ZNF718Q3SXZ3 478 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 TMUB2Q71RG4 321 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 TAF9BQ9HBM6 251 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 TAS2R4Q9NYW5 299 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 GLCEO94923 617 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 PFN3P60673 137 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 MLF2Q15773 248 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-202ENST00000359082 CCSMST1Q4G0I0 132 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 NIPSNAP3BQ9BS92 247 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 SERTM2A0A1B0GWG4 89 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 CYB561P49447 251 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 SLC39A13Q96H72 371 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 REEP6Q96HR9 211 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 HS3ST2Q9Y278 367 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 SOHLH1Q5JUK2 328 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 ALKAL1Q6UXT8 129 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 OR51H1Q8NH63 302 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 MYH15Q9Y2K3 1946 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 RRP8O43159 456 aaKnown RBP16.88■□□□□ 0.29
SHANK1-202ENST00000359082 ZNF626Q68DY1 528 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 NKAIN3Q8N8D7 197 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 OR2G3Q8NGZ4 309 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 KIRREL1Q96J84 757 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 MMACHCQ9Y4U1 282 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 PAQR9Q6ZVX9 377 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 BPIFCQ8NFQ6 507 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 APH1AQ96BI3 265 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 RBFOX1Q9NWB1 397 aaKnown RBP16.88■□□□□ 0.29
SHANK1-202ENST00000359082 TM4SF4P48230 202 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-202ENST00000359082 SOWAHCQ53LP3 525 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-202ENST00000359082 CLDN22Q8N7P3 220 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 NTNG1Q9Y2I2 539 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 IGHV3-64DA0A0J9YX35 117 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 HEXAP06865 529 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 FPR3P25089 353 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 ECI1P42126 302 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 GJC3Q8NFK1 279 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 DEFB127Q9H1M4 99 aa16.88■□□□□ 0.29
SHANK1-202ENST00000359082 TLCD2A6NGC4 264 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 SEC14L6B5MCN3 397 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 SOD1P00441 154 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 HPNP05981 417 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 CSNK1G2P78368 415 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 SSX9Q7RTT3 188 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 L3MBTL4Q8NA19 623 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 CRYGNQ8WXF5 182 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 EMC7Q9NPA0 242 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 PMS2P2O95744 297 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 SLC35D3Q5M8T2 416 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 MAGEB4O15481 346 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-202ENST00000359082 TBPP20226 339 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 PHYHD1Q5SRE7 291 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 RTL8AQ9BWD3 113 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 PTCRAQ6ISU1 281 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-202ENST00000359082 MFSD12Q6NUT3 480 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 TMEM102Q8N9M5 508 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-202ENST00000359082 OR51S1Q8NGJ8 323 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 SFT2D1Q8WV19 159 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 H1FNTQ75WM6 255 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-202ENST00000359082 OR10R2Q8NGX6 335 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 EPHX3Q9H6B9 360 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 PLEKHF2Q9H8W4 249 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 ATP13A2Q9NQ11 1180 aa16.87■□□□□ 0.29
SHANK1-202ENST00000359082 A0A1B0GX78 115 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 NRG2O14511 850 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-202ENST00000359082 CTNSO60931 367 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 MYOGP15173 224 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 YRDCQ86U90 279 aaKnown RBP16.86■□□□□ 0.29
SHANK1-202ENST00000359082 TMEM200AQ86VY9 491 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 SYT11Q9BT88 431 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 ACOXLQ9NUZ1 547 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 S100A11P31949 105 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 MLF1P58340 268 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 EXT1Q16394 746 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 ZMAT1Q5H9K5 638 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 PLAC9Q5JTB6 97 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 FAM74A1Q5RGS3 127 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 ZNF416Q9BWM5 594 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 V9GYS6 101 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 UBE2G1P62253 170 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 KCTD11Q693B1 232 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 SIRT6Q8N6T7 355 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 GPR78Q96P69 363 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 FAM103A1Q9BTL3 118 aaKnown RBP16.86■□□□□ 0.29
SHANK1-202ENST00000359082 EMC6Q9BV81 110 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 UGT2A1Q9Y4X1 527 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 RAB19A4D1S5 217 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 SLC16A6O15403 523 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 DBPQ10586 325 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-202ENST00000359082 MAVSQ7Z434 540 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 UBAC2Q8NBM4 344 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 PDXPQ96GD0 296 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 B4GALT3O60512 393 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 METTL15P1P0C7V9 234 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 OR2B11Q5JQS5 317 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms