RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SPSB2Q99619 263 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF426Q9BUY5 554 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 GPN3Q9UHW5 284 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 KCNE5Q9UJ90 142 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 C19orf53Q9UNZ5 99 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 MMACHCQ9Y4U1 282 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 IGKV3D-11A0A0A0MRZ8 115 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 TCRBV16S1A1N1A0A5B0 115 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 BLACEA4D250 179 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 PPP1R3DO95685 299 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 IFNGP01579 166 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 LPLP06858 475 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 CALCBP10092 127 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 PPP3CBP16298 524 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 RPS18P62269 152 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 SERTAD2Q14140 314 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 SLC25A25Q6KCM7 469 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 CYB561A3Q8NBI2 242 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 OR10Z1Q8NGY1 313 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 C15orf40Q8WUR7 153 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 NSMAFQ92636 917 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 HAVCR1Q96D42 359 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 CRB3Q9BUF7 120 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 MCCC2Q9HCC0 563 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 C14orf105Q9NVL8 296 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 AKAP13Q12802 2813 aa11.46□□□□□ -0.57
RTFDC1-202ENST00000357348 GFRA3O60609 400 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 GKN3PP0CG01 181 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 MAPK3P27361 379 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC6A6P31641 620 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 P2RX1P51575 399 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 EMP2P54851 167 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 DCST2Q5T1A1 773 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 FCRLBQ6BAA4 426 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TMUB2Q71RG4 321 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC36A1Q7Z2H8 476 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 MEIOBQ8N635 442 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 OR4N2Q8NGD1 307 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 OR14A16Q8NHC5 309 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 CNN2Q99439 309 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 PELOQ9BRX2 385 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 OR10A5Q9H207 317 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 NOX4Q9NPH5 578 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 KLK11Q9UBX7 282 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 CHRNA9Q9UGM1 479 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 OPN4Q9UHM6 478 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 PTRH2Q9Y3E5 179 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 CFAP47Q6ZTR5 3102 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 IGLV3-12A0A075B6K2 115 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TRAV27A0A087WT01 109 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TRBV2A0A0J9YWF9 115 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 CDC14CA4D256 554 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 ACOT7O00154 380 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TM4SF5O14894 197 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 RP2O75695 350 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 AQP8O94778 261 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TCN2P20062 427 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 GABRA3P34903 492 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 EMDP50402 254 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 DLX5P56178 289 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 SFRP5Q5T4F7 317 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TMEM164Q5U3C3 297 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 MRPL14Q6P1L8 145 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 FIGNL1Q6PIW4 674 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 FCRLAQ7L513 359 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC35F2Q8IXU6 374 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 COX18Q8N8Q8 333 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 DNAAF1Q8NEP3 725 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 C16orf52Q8NHV5 167 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 METTL21AQ8WXB1 218 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 GCDHQ92947 438 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 WDR89Q96FK6 387 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 TGIF2Q9GZN2 237 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 EXOSC3Q9NQT5 275 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 FBXO34Q9NWN3 711 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 OR5V1Q9UGF6 321 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 LAMA5O15230 3695 aa11.45□□□□□ -0.58
RTFDC1-202ENST00000357348 A0A087WV62 115 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 NPIPA5A0A0B4J1W7 369 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 A0A1B0GX12 115 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 GXYLT2A0PJZ3 443 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 NPIPA7E9PJI5 369 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 PEX12O00623 359 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 ALOX12BO75342 701 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 GYPBP06028 91 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 NPIPA8P0DM63 369 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 ANXA7P20073 488 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 EDNRAP25101 427 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 MAP3K8P41279 467 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 RBM34P42696 430 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 HCCSP53701 268 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 OR1S1Q8NH92 325 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 FBXW5Q969U6 566 aa11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 S100A16Q96FQ6 103 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-202ENST00000357348 TNFRSF13CQ96RJ3 184 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms