RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CNEP1R1Q8N9A8 125 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 GOT1L1Q8NHS2 421 aaPredicted RBP10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KIRREL1Q96J84 757 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 JAM3Q9BX67 310 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 HRH4Q9H3N8 390 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 GCM1Q9NP62 436 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 TNFRSF12AQ9NP84 129 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 NECAP2Q9NVZ3 263 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 CHRNA9Q9UGM1 479 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 SPTBN2O15020 2390 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ARPC4-TTLL3A0A0A6YYG9 625 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 P2RY10O00398 339 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 SHOXO15266 292 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 FADS1O60427 444 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 DFFBO76075 338 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 SERPINA7P05543 415 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 ETV5P41161 510 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF74Q16587 644 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 SLC7A5P1Q8MH63 180 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 PLPP5Q8NEB5 264 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 BCO1Q9HAY6 547 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 GPATCH2Q9NW75 528 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 COPS3Q9UNS2 423 aa10.77□□□□□ -0.68
COL9A1-202ENST00000357250 RAB5CP51148 216 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 GP2P55259 537 aaKnown RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 EGR3Q06889 387 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 TPBGQ13641 420 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 TIGD3Q6B0B8 471 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF813Q6ZN06 617 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 BHLHA9Q7RTU4 235 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 HAS2Q92819 552 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 CPNE4Q96A23 557 aaPredicted RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 SLCO4A1Q96BD0 722 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 FOXN4Q96NZ1 517 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 FGF20Q9NP95 211 aaPredicted RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 SLC22A11Q9NSA0 550 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 DHCR7Q9UBM7 475 aaKnown RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 BTBD17A6NE02 478 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 SOD1P00441 154 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 CDC20Q12834 499 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 LIPNQ5VXI9 398 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 KDM8Q8N371 416 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 OR10K1Q8NGX5 313 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 TERB2Q8NHR7 220 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 FGGYQ96C11 551 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 PBX4Q9BYU1 374 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 SMIM3Q9BZL3 60 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 CHST11Q9NPF2 352 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 ATP13A2Q9NQ11 1180 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 PRRT4C9JH25 899 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 TMPRSS11DO60235 418 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 PRKRAO75569 313 aaKnown RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 BSGP35613 385 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 FAM53BQ14153 422 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 NKAIN1Q4KMZ8 207 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 DCXRQ7Z4W1 244 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 ARIH2OSQ8N7S6 290 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 SCARB1Q8WTV0 552 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 FRZBQ92765 325 aa10.77□□□□□ -0.69
COL9A1-202ENST00000357250 MBNL1Q9NR56 388 aaKnown RBP10.77□□□□□ -0.69
COL9A1-202ENST00000357250 TBX19O60806 448 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 CLEC2LP0C7M8 214 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 BCKDHBP21953 392 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SSBP1Q04837 148 aaKnown RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 B3GLCTQ6Y288 498 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 DYNC2LI1Q8TCX1 351 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 DYNLRB1Q9NP97 96 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 HINT3Q9NQE9 182 aaKnown RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 TBC1D29Q9UFV1 150 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 ARGFXA6NJG6 315 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 MSL3P1P0C860 447 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SLC19A1P41440 591 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 TRMT12Q53H54 448 aaKnown RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 TCTN3Q6NUS6 607 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SYT9Q86SS6 491 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 RPS19BP1Q86WX3 136 aaKnown RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 ADGRF3Q8IZF5 1079 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 LRRC18Q8N456 261 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 RASD2Q96D21 266 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 IL21Q9HBE4 155 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 FBXL2Q9UKC9 423 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 OTOL1A6NHN0 477 aaPredicted RBP10.76□□□□□ -0.69
COL9A1-202ENST00000357250 TAAR5O14804 337 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 PIP5K1CO60331 668 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 PRAMEF4O60810 478 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SNCAP37840 140 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 CYB561P49447 251 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 DOC2BQ14184 412 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 PRAMEF20Q5VT98 475 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 CELF2-AS1Q8N7Q2 184 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 PXT1Q8NFP0 134 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 SEH1LQ96EE3 360 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 GALNT9Q9HCQ5 603 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 EP400Q96L91 3159 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 WNT11O96014 354 aa10.76□□□□□ -0.69
COL9A1-202ENST00000357250 OPN1LWP04000 364 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms