RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SLC22A12Q96S37 553 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 WWTR1Q9GZV5 400 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 HIPK2Q9H2X6 1198 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 SEMA6CQ9H3T2 930 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.63□□□□□ -0.23
CHD4-201ENST00000357008 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 H7C1Q1 480 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 JTBO76095 146 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 HABP2Q14520 560 aaPredicted RBP13.63□□□□□ -0.23
CHD4-201ENST00000357008 C1orf140Q5VVS0 124 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 NLRC3Q7RTR2 1065 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 DPPA2Q7Z7J5 298 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 CSAG2Q9Y5P2 127 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ARRDC5A6NEK1 342 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 CD1EP15812 388 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 PHLDA2Q53GA4 152 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 TMEM31Q5JXX7 168 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 RABEPKQ7Z6M1 372 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 PRSS44E7EML9 344 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 OLFM2O95897 454 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 RPL27P61353 136 aaKnown RBP13.63□□□□□ -0.23
CHD4-201ENST00000357008 SH2D5Q6ZV89 423 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 GJC3Q8NFK1 279 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ZNF775Q96BV0 537 aaPredicted RBP13.63□□□□□ -0.23
CHD4-201ENST00000357008 GAB2Q9UQC2 676 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 KLK8O60259 260 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 SLC6A12P48065 614 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 LIM2P55344 173 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 ARHGAP11BQ3KRB8 267 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 HRASLSQ9HDD0 168 aa13.63□□□□□ -0.23
CHD4-201ENST00000357008 F6UZH7 168 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 IGFBP1P08833 259 aaPredicted RBP13.62□□□□□ -0.23
CHD4-201ENST00000357008 TOR2AQ5JU69 321 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 FAHD1Q6P587 224 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 CDH26Q8IXH8 852 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 SYS1Q8N2H4 156 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 PIGTQ969N2 578 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 GON4LQ3T8J9 2241 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 TGFBR1P36897 503 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 FAM78AQ5JUQ0 283 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 GABRG1Q8N1C3 465 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 ZNF680Q8NEM1 530 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 TGIF2Q9GZN2 237 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 ZFP92A6NM28 416 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 SOCS7O14512 581 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 EIF4E2O60573 245 aaKnown RBP13.62□□□□□ -0.23
CHD4-201ENST00000357008 SCRG1O75711 98 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 H2AFB1P0C5Y9 115 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
CHD4-201ENST00000357008 SUMF1Q8NBK3 374 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 MED18Q9BUE0 208 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 SEMA4CQ9C0C4 833 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 SLC25A19Q9HC21 320 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 OR6C76A6NM76 312 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 ABHD16AO95870 558 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 ANKRD34AQ69YU3 496 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 GCNT2Q8N0V5 402 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 SDF2Q99470 211 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 RNF32Q9H0A6 362 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 C19orf53Q9UNZ5 99 aaPredicted RBP13.62□□□□□ -0.23
CHD4-201ENST00000357008 COA3Q9Y2R0 106 aaPredicted RBP13.62□□□□□ -0.23
CHD4-201ENST00000357008 BTBD17A6NE02 478 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 TUBAL3A6NHL2 446 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 RAD52P43351 418 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 ZNF92Q03936 586 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 LTB4R2Q9NPC1 389 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
CHD4-201ENST00000357008 URGCP-MRPS24S4R325 110 aa13.62□□□□□ -0.23
CHD4-201ENST00000357008 SNRPGP15A8MWD9 76 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 FABP5Q01469 135 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 PRAMEF20Q5VT98 475 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 GRINAQ7Z429 371 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 RHBDD1Q8TEB9 315 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 APH1BQ8WW43 257 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 MS4A6EQ96DS6 147 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 C20orf24Q9BUV8 137 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 PLK3Q9H4B4 646 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 PPP1R14DQ9NXH3 145 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 LGALS8O00214 317 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 RGS11O94810 467 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 PXNP49023 591 aaPredicted RBP13.61□□□□□ -0.23
CHD4-201ENST00000357008 AQP6Q13520 282 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 CDKN3Q16667 212 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 LTC4SQ16873 150 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 METRNLQ641Q3 311 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 DOK3Q7L591 496 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 OR1J2Q8NGS2 313 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 NXT1Q9UKK6 140 aaKnown RBP13.61□□□□□ -0.23
CHD4-201ENST00000357008 FXYD1O00168 92 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 DUSP1P28562 367 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 SSR4P51571 173 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
CHD4-201ENST00000357008 DOC2BQ14184 412 aa13.61□□□□□ -0.23
CHD4-201ENST00000357008 CPEB2Q7Z5Q1 589 aaKnown RBP13.61□□□□□ -0.23
CHD4-201ENST00000357008 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms