RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZNF248Q8NDW4 579 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 OR8S1Q8NH09 359 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 NPRL2Q8WTW4 380 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 RSC1A1Q92681 617 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 PELI1Q96FA3 418 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 MYADMQ96S97 322 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
RTN3-205ENST00000356000 TAAR2Q9P1P5 351 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 SLCO1B1Q9Y6L6 691 aa14.3□□□□□ -0.12
RTN3-205ENST00000356000 TMEM235A6NFC5 223 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 GMFGO60234 142 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 B4GALT2O60909 372 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 RAC2P15153 192 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 ZBTB25P24278 435 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 ID4P47928 161 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 SIRPAP78324 504 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 DCXRQ7Z4W1 244 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 GABRG1Q8N1C3 465 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 JAGN1Q8N5M9 183 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 OR13C3Q8NGS6 347 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 SMPDL3AQ92484 453 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 ADGRG7Q96K78 797 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 Q9Y3F1 56 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 ATG4BQ9Y4P1 393 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 HSPA12AO43301 675 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 RPLP1P05386 114 aaKnown RBP14.29□□□□□ -0.12
RTN3-205ENST00000356000 SLC35G4P0C7Q5 338 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 CCR4P51679 360 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 ACTC1P68032 377 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 ACTA1P68133 377 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 TP53I3Q53FA7 332 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 YOD1Q5VVQ6 348 aaPredicted RBP14.29□□□□□ -0.12
RTN3-205ENST00000356000 KHDRBS2Q5VWX1 349 aaKnown RBP14.29□□□□□ -0.12
RTN3-205ENST00000356000 OR2T2Q6IF00 324 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 SKA2Q8WVK7 121 aaPredicted RBP14.29□□□□□ -0.12
RTN3-205ENST00000356000 C22orf15Q8WYQ4 148 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 DIO2Q92813 273 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 GAL3ST2Q9H3Q3 398 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 CACNG4Q9UBN1 327 aa14.29□□□□□ -0.12
RTN3-205ENST00000356000 A8MXE2 369 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 M0QZK8 103 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 DUSP11O75319 330 aaKnown RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 ALOX12BO75342 701 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 ZNF821O75541 412 aaPredicted RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 NSA2O95478 260 aaKnown RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 ZGLP1P0C6A0 271 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 THEGLP0DJG4 465 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 PDX1P52945 283 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 SKP1P63208 163 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 ZNF311Q5JNZ3 666 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 RPL22L1Q6P5R6 122 aaKnown RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 CLEC2AQ6UVW9 174 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 Q6ZRG5 221 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 LYG2Q86SG7 212 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 TRAPPC5Q8IUR0 188 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 COMMD1Q8N668 190 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 MITD1Q8WV92 249 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 STACQ99469 402 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 PDCD1LG2Q9BQ51 273 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 OR51V1Q9H2C8 321 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 PARD6AQ9NPB6 346 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 OR2S2Q9NQN1 319 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 P2RX2Q9UBL9 471 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 A0A087WZY1 265 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 TRBV2A0A0J9YWF9 115 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 MEIS3P1A6NDR6 274 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 CDRT15L2A8MXV6 281 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 SLC16A5O15375 505 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 GGCTO75223 188 aaKnown RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 TXNDC12O95881 172 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 GJD3Q8N144 294 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 ZNF283Q8N7M2 679 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 OR2M4Q96R27 311 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 CDC6Q99741 560 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 SRMSQ9H3Y6 488 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 CRLS1Q9UJA2 301 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 LOC100509620A0A075B734 347 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 EEF1E1-BLOC1S5C9J1V9 151 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 SYT7O43581 403 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 IL2RAP01589 272 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 CXCL1P09341 107 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 CLUP10909 449 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 SERPINF1P36955 418 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 SNCAP37840 140 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 BUD31P41223 144 aaPredicted RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 SLC16A1P53985 500 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 UCP2P55851 309 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 TAS2R19P59542 299 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 LTBQ06643 244 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 ST3GAL3Q11203 375 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 DECR1Q16698 335 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 FBXW9Q5XUX1 488 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 KLHDC9Q8NEP7 349 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 CLP1Q92989 425 aaKnown RBP14.28□□□□□ -0.12
RTN3-205ENST00000356000 PPP1R16AQ96I34 528 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 FBXO7Q9Y3I1 522 aa14.28□□□□□ -0.12
RTN3-205ENST00000356000 MSGN1A6NI15 193 aa14.27□□□□□ -0.13
RTN3-205ENST00000356000 PTGESO14684 152 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms