RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZMAT3Q9HA38 289 aaKnown RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 CHRNA9Q9UGM1 479 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 OR6C68A6NDL8 312 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 TMEM235A6NFC5 223 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 TOR2AQ5JU69 321 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 MARCH3Q86UD3 253 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 L3MBTL4Q8NA19 623 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 TMEM178AQ8NBL3 297 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 RTL8AQ9BWD3 113 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 OBP2AQ9NY56 170 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ZMAT5Q9UDW3 170 aaKnown RBP13.69□□□□□ -0.22
LMX1B-201ENST00000355497 AK3Q9UIJ7 227 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF724A8MTY0 619 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 SOD1P00441 154 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 CD14P08571 375 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 NKX2-1P43699 371 aaPredicted RBP13.69□□□□□ -0.22
LMX1B-201ENST00000355497 HCCSP53701 268 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF620Q6ZNG0 422 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 APH1AQ96BI3 265 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 BCO1Q9HAY6 547 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 CLCF1Q9UBD9 225 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 CCSO14618 274 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 TAAR5O14804 337 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 PRKRAO75569 313 aaKnown RBP13.69□□□□□ -0.22
LMX1B-201ENST00000355497 NHSL2Q5HYW2 709 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF534Q76KX8 674 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 SLC35B4Q969S0 331 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 GLIPR2Q9H4G4 154 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 CSNK1G1Q9HCP0 422 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 KIR2DS1A0A191URI9 304 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ADAM12O43184 909 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 LGI1O95970 557 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 MT-ATP6P00846 226 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 HLA-FP30511 346 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 KIR2DS4P43632 304 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 PTTG1IPP53801 180 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 KIR2DS1Q14954 304 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 H3F3CQ6NXT2 135 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 DOK3Q7L591 496 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 CISD2Q8N5K1 135 aaKnown RBP13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF511Q8NB15 262 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 OR5B3Q8NH48 314 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 ZFPM2Q8WW38 1151 aa13.69□□□□□ -0.22
LMX1B-201ENST00000355497 RYDENQ9NUL5 291 aaKnown RBP13.69□□□□□ -0.22
LMX1B-201ENST00000355497 OR2A25A4D2G3 310 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 HS3ST1O14792 307 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 GLAP06280 429 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 CHRM2P08172 466 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 POLR2IP36954 125 aaKnown RBP13.68□□□□□ -0.22
LMX1B-201ENST00000355497 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PLAC9Q5JTB6 97 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 MORN1Q5T089 497 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 OR1M1Q8NGA1 313 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 B3GALT5Q9Y2C3 310 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 SLC5A10A0PJK1 596 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 GPR171O14626 319 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 EFSO43281 561 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 CALCBP10092 127 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 GNB1P62873 340 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PDZD11Q5EBL8 140 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 THNSL2Q86YJ6 484 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 LSMEM2Q8N112 164 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 MED30Q96HR3 178 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 RIMS4Q9H426 269 aaPredicted RBP13.68□□□□□ -0.22
LMX1B-201ENST00000355497 TMEM38AQ9H6F2 299 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 C12orf49Q9H741 205 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PRAMEF25A6NGN4 478 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 KLRC4-KLRK1H3BQV0 150 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 CYTIPO60759 359 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 ACHEP22303 614 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PRAMEF5Q5TYX0 476 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PRAMEF6Q5VXH4 476 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 NKAIN2Q5VXU1 208 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 ADAMTSL4Q6UY14 1074 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 SOX7Q9BT81 388 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 NME2P1O60361 137 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF90Q03938 601 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 LINC00696Q6ZRV3 163 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 NUDT9Q9BW91 350 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 HSFX1Q9UBD0 423 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 CGGBP1Q9UFW8 167 aaPredicted RBP13.68□□□□□ -0.22
LMX1B-201ENST00000355497 CSAG2Q9Y5P2 127 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 TFAP2AP05549 437 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 GIPP09681 153 aaPredicted RBP13.68□□□□□ -0.22
LMX1B-201ENST00000355497 SPI1P17947 270 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 ADRA2CP18825 462 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PDZK1IP1Q13113 114 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 IHHQ14623 411 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 SLC48A1Q6P1K1 146 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 PRSS45Q7RTY3 260 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 SEH1LQ96EE3 360 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 NMES1Q9C002 83 aa13.68□□□□□ -0.22
LMX1B-201ENST00000355497 MBLAC1A4D2B0 266 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-201ENST00000355497 TCAPO15273 167 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 ST8SIA3O43173 380 aa13.67□□□□□ -0.22
LMX1B-201ENST00000355497 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms