RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TMEM269A0A1B0GVZ9 245 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 HTR2CP28335 458 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 UCNP55089 124 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 TAS2R31P59538 309 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 TSC22D1Q15714 1073 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 OR9K2Q8NGE7 335 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 BAHD1Q8TBE0 780 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 PHYHIPQ92561 330 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 H0YIG0 161 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 P2RX6O15547 441 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 MTRF1O75570 445 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 HEXAP06865 529 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 MAOAP21397 527 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 TAGLNQ01995 201 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 KRBOX4Q5JUW0 171 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 OR5M10Q6IEU7 315 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF793Q6ZN11 406 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 MRPL21Q7Z2W9 205 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 OR51S1Q8NGJ8 323 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 WDR34Q96EX3 536 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 NRTNQ99748 197 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 MIXL1Q9H2W2 232 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 LSM5Q9Y4Y9 91 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 NUMA1Q14980 2115 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 STK17BO94768 372 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 TMEM215Q68D42 235 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SLC16A9Q7RTY1 509 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 PLPP7Q8NBV4 271 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SCARB1Q8WTV0 552 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 FBLIM1Q8WUP2 373 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 MENTQ9BUN1 341 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 POFUT1Q9H488 388 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 ZMAT3Q9HA38 289 aaKnown RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 GIPP09681 153 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 POU3F4P49335 361 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SRSF5Q13243 272 aaKnown RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 IL11RAQ14626 422 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 MED25Q71SY5 747 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 PXT1Q8NFP0 134 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 CCL4L1Q8NHW4 92 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 MAP6Q96JE9 813 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SLC5A7Q9GZV3 580 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 CYSLTR2Q9NS75 346 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 EXO1Q9UQ84 846 aaKnown RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 U3KQ87 197 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 GPR171O14626 319 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 FADS1O60427 444 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 NSA2O95478 260 aaKnown RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 WNT11O96014 354 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SFTPCP11686 197 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SPI1P17947 270 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 CD79BP40259 229 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 UBE2MP61081 183 aaKnown RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 ZBTB37Q5TC79 503 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 OR1J2Q8NGS2 313 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 MFSD8Q8NHS3 518 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SMIM19Q96E16 107 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SORCS2Q96PQ0 1159 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 GLSO94925 669 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 CD53P19397 219 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SLC35A1P78382 337 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 TMEM176BQ3YBM2 270 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 FAM122CQ6P4D5 195 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 GUSBP11Q6P575 273 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 PPP1R35Q8TAP8 253 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 STK35Q8TDR2 534 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 SIRT3Q9NTG7 399 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 GPATCH2Q9NW75 528 aa11.25□□□□□ -0.61
COLCA1-201ENST00000355430 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
COLCA1-201ENST00000355430 PRAMEF25A6NGN4 478 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 G3V3Y1 287 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 IL2RAP01589 272 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 CD14P08571 375 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 MSX1P28360 303 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 TAS2R20P59543 309 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 MYBPHQ13203 477 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 COX15Q7KZN9 410 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 NLRC3Q7RTR2 1065 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 OR8D4Q8NGM9 314 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 S100A2P29034 98 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 CAMLGP49069 296 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 EMDP50402 254 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF79Q15937 498 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 MEP1BQ16820 701 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 CPEB2Q7Z5Q1 589 aaKnown RBP11.24□□□□□ -0.61
COLCA1-201ENST00000355430 SLC43A2Q8N370 569 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 ZG16BQ96DA0 208 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 DERL3Q96Q80 235 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 DUSP15Q9H1R2 295 aaPredicted RBP11.24□□□□□ -0.61
COLCA1-201ENST00000355430 IL20Q9NYY1 176 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms