RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ZNF627Q7L945 461 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 MAMDC2Q7Z304 686 aaPredicted RBP17.64■□□□□ 0.41
COL13A1-201ENST00000354547 BPHLQ86WA6 291 aaPredicted RBP17.64■□□□□ 0.41
COL13A1-201ENST00000354547 FAM3DQ96BQ1 224 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 SFXN2Q96NB2 322 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF285Q96NJ3 590 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 DIABLOQ9NR28 239 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 NPTNQ9Y639 398 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 TRBV5-7A0A0A0MS05 114 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 TMED7-TICAM2A0A0A6YYA0 188 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 PRSS37A4D1T9 235 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 LINC00862A6NCI5 91 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 POM121CA8CG34 1229 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 EGR3Q06889 387 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 OLFML2AQ68BL7 652 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 LRRC20Q8TCA0 184 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 NPAS1Q99742 590 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 DPYSL5Q9BPU6 564 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 MRPL22Q9NWU5 206 aaKnown RBP17.64■□□□□ 0.41
COL13A1-201ENST00000354547 TMED7Q9Y3B3 224 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 MAB21L2Q9Y586 359 aa17.64■□□□□ 0.41
COL13A1-201ENST00000354547 ARPC5O15511 151 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 CD3DP04234 171 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 NME1P15531 152 aaKnown RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 EIF2B1Q14232 305 aaKnown RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 OR10K2Q6IF99 312 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 TMEM205Q6UW68 189 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 OR1L3Q8NH93 324 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 ANGPTL6Q8NI99 470 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 MED30Q96HR3 178 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 CHST6Q9GZX3 395 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 IGHV1OR15-9A0A0B4J2B8 117 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 RPS10-NUDT3A0A1W2PQS6 291 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 POU3F2P20265 443 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 ABCD3P28288 659 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 RPL27P61353 136 aaKnown RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 MRPS10P82664 201 aaKnown RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 SIGIRRQ6IA17 410 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 EID2Q8N6I1 236 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 OR8B4Q96RC9 309 aa17.63■□□□□ 0.41
COL13A1-201ENST00000354547 CCNL2Q96S94 520 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF587Q96SQ5 575 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 COA3Q9Y2R0 106 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-201ENST00000354547 VPS13AQ96RL7 3174 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 PGCP20142 388 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 RAB11BQ15907 218 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF626Q68DY1 528 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 C11orf88Q6PI97 169 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 LRFN4Q6PJG9 635 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 LINC00346Q8IVM7 164 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 NKD1Q969G9 470 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 ZDHHC12Q96GR4 267 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 RABL2AQ9UBK7 228 aaPredicted RBP17.62■□□□□ 0.41
COL13A1-201ENST00000354547 FBXL3Q9UKT7 428 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 RABL2BQ9UNT1 228 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 DHDHQ9UQ10 334 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 FXYD6-FXYD2A0A087WZ82 144 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 H7C417 338 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 EIF1AYO14602 144 aaKnown RBP17.62■□□□□ 0.41
COL13A1-201ENST00000354547 MCHR2Q969V1 340 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 MRI1Q9BV20 369 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 PTDSS2Q9BVG9 487 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 FXYD6Q9H0Q3 95 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 TAS2R4Q9NYW5 299 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 COPS7AQ9UBW8 275 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 MTFP1Q9UDX5 166 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 RNF215Q9Y6U7 377 aa17.62■□□□□ 0.41
COL13A1-201ENST00000354547 GOSR2O14653 212 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 CSN2P05814 226 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 FOLR1P15328 257 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 SLC6A8P48029 635 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 CSNK1EP49674 416 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 FMODQ06828 376 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 SPOCK1Q08629 439 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ELAVL1Q15717 326 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 CSRP2Q16527 193 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 SLC18B1Q6NT16 456 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ANKRD16Q6P6B7 361 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 FAM198BQ6UWH4 519 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF679Q8IYX0 411 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 OR51A2Q8NGJ7 313 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 TNFAIP8L1Q8WVP5 186 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 TTC9Q92623 222 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 WWTR1Q9GZV5 400 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 LILRA5A6NI73 299 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF432O94892 652 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 NFYAP23511 347 aaPredicted RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 FAUP35544 74 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 AP2S1P53680 142 aaPredicted RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 C4orf46Q504U0 113 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 GLYATL3Q5SZD4 288 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 C1orf140Q5VVS0 124 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ASPHD2Q6ICH7 369 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 SEZ6L2Q6UXD5 910 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ADGRG3Q86Y34 549 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ABHD6Q9BV23 337 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 RDH8Q9NYR8 311 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ATXN7L1Q9ULK2 861 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms