RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 THSD4Q6ZMP0 1018 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 SLC16A14Q7RTX9 510 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 TRPM8Q7Z2W7 1104 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 SYT14Q8NB59 555 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 OR51F2Q8NH61 342 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 MOSPD2Q8NHP6 518 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 ZNF519Q8TB69 540 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 SYNPRQ8TBG9 265 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 TMEM255BQ8WV15 326 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 CDH20Q9HBT6 801 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 ARL8BQ9NVJ2 186 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 BLOC1S5-TXNDC5H3BN57 136 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 RGS9O75916 674 aaPredicted RBP13.5□□□□□ -0.25
PDGFA-201ENST00000354513 OR7A10O76100 309 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 BCL10O95999 233 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 MT-ND1P03886 318 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 UMPSP11172 480 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 FUT1P19526 365 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 FUT4P22083 530 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 CDAP32320 146 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 AQP2P41181 271 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 CRYBB2P43320 205 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 UCP2P55851 309 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 CLRN1P58418 232 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 MVKQ03426 396 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 FMODQ06828 376 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 KRT72Q14CN4 511 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 TBC1D28Q2M2D7 210 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 SLC36A2Q495M3 483 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 COQ5Q5HYK3 327 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 SLC30A8Q8IWU4 369 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 ZNF101Q8IZC7 436 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 LRRC18Q8N456 261 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
PDGFA-201ENST00000354513 HDAC2Q92769 488 aaKnown RBP13.5□□□□□ -0.25
PDGFA-201ENST00000354513 RCN3Q96D15 328 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 TMPRSS13Q9BYE2 586 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 C1orf198Q9H425 327 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 OCEL1Q9H607 264 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 ZNF665Q9H7R5 613 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 RNF121Q9H920 327 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 TAGLN3Q9UI15 199 aa13.5□□□□□ -0.25
PDGFA-201ENST00000354513 LOC100509620A0A075B734 347 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 LOC105371242A0A075B767 164 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 A0A0A6YYJ9 748 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 TRAV20A0A0B4J274 112 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 SLC22A23A1A5C7 686 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 PIP5K1CO60331 668 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 FARS2O95363 451 aaKnown RBP13.49□□□□□ -0.25
PDGFA-201ENST00000354513 PNPP00491 289 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 IGHV3-13P01766 116 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 LCKP06239 509 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 ACADSP16219 412 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 ZNF32P17041 273 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 MPV17P39210 176 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 SPRNQ5BIV9 151 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 RABL3Q5HYI8 236 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 PABPC1L2AQ5JQF8 200 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 DPPA2Q7Z7J5 298 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 PCYOX1LQ8NBM8 494 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 ZFAND2BQ8WV99 257 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 LIPHQ8WWY8 451 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 POM121L2Q96KW2 1035 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 NANOGQ9H9S0 305 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 GRIP1Q9Y3R0 1128 aa13.49□□□□□ -0.25
PDGFA-201ENST00000354513 IGHV1-69-2A0A0G2JMI3 117 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 CENPBD1B2RD01 187 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 PLPP2O43688 288 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 IGF2P01344 180 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 IGHV2-5P01817 119 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 MAKP20794 623 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 RBMXP38159 391 aaKnown RBP13.48□□□□□ -0.25
PDGFA-201ENST00000354513 MMP15P51511 669 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 MRPS34P82930 218 aaKnown RBP13.48□□□□□ -0.25
PDGFA-201ENST00000354513 PCGF3Q3KNV8 242 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 NANOGP8Q6NSW7 305 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 SLC25A47Q6Q0C1 308 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 RFPL4BQ6ZWI9 263 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 USP51Q70EK9 711 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 OR1J1Q8NGS3 322 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 IPCEF1Q8WWN9 437 aaPredicted RBP13.48□□□□□ -0.25
PDGFA-201ENST00000354513 MARS2Q96GW9 593 aaKnown RBP13.48□□□□□ -0.25
PDGFA-201ENST00000354513 NSL1Q96IY1 281 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 PLA2G12AQ9BZM1 189 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 BCL2L14Q9BZR8 327 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 EFCAB1Q9HAE3 211 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 INIPQ9NRY2 104 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 GID8Q9NWU2 228 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.48□□□□□ -0.25
PDGFA-201ENST00000354513 WIPI2Q9Y4P8 454 aa13.48□□□□□ -0.25
PDGFA-201ENST00000354513 A0A1W2PRG6 482 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 ZSCAN5BA6NJL1 495 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 NPIPB13A6NJU9 1138 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 NPIPB4C9JG80 1138 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 ENTPD5O75356 428 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 FSHBP01225 129 aa13.47□□□□□ -0.25
PDGFA-201ENST00000354513 IGHV1-46P01743 117 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms