RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 TBXA2RP21731 343 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 RPS18P62269 152 aaKnown RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 RPL19P84098 196 aaKnown RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 OVCH1Q7RTY7 1134 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 OR5AS1Q8N127 324 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 BPIFB2Q8N4F0 458 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 FAM71CQ8NEG0 241 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 OSGIN1Q9UJX0 560 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 A0A0G2JMP0 313 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 GRPP07492 148 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 RPS27P42677 84 aaKnown RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TIAL1Q01085 375 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OTPQ5XKR4 325 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 APOOLQ6UXV4 268 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 DND1Q8IYX4 353 aaKnown RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OR4M2Q8NGB6 313 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 HMGCLL1Q8TB92 370 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 DUS3LQ96G46 650 aaKnown RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 DUSP15Q9H1R2 295 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 CRLF2Q9HC73 371 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 LUZP4Q9P127 313 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SIPA1L1O43166 1804 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 A0A1B0GTQ1 180 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 I3L521 148 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 GAAP10253 952 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OR8B8Q15620 311 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 GDF15Q99988 308 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 NOX3Q9HBY0 568 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OCIAD1Q9NX40 245 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TIMM10BQ9Y5J6 103 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 NKX2-2O95096 273 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TK1P04183 234 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SRMP19623 302 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TSC22D1Q15714 1073 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OR10G3Q8NGC4 313 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OR2T35Q8NGX2 323 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 DPCDQ9BVM2 203 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 PRSS37A4D1T9 235 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 FIGNL2A6NMB9 653 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 DSCR4P56555 118 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 IL13RA1P78552 427 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 CARFQ8N187 725 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 LILRB2Q8N423 598 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OR4M1Q8NGD0 313 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 RAB39BQ96DA2 213 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 VRK1Q99986 396 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TXNIPQ9H3M7 391 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 ACKR4Q9NPB9 350 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TRGV8A0A0C4DH27 118 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 PEX14O75381 377 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TFP02787 698 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 GUSBP08236 651 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 IDH3GP51553 393 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SUMO3P55854 103 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 ZXDAP98168 799 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SYT6Q5T7P8 510 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 CALHM3Q86XJ0 350 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SEMA6DQ8NFY4 1073 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 OR51D1Q8NGF3 324 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SMAP2Q8WU79 429 aaPredicted RBP13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SPIN2AQ99865 258 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 SPIN2BQ9BPZ2 258 aa13.55□□□□□ -0.24
COL17A1-201ENST00000353479 TRDV1A0A1B0GX56 115 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 F5H5P2 479 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 RGS19P49795 217 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 DIO1P49895 249 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 PCBP4P57723 403 aaKnown RBP13.54□□□□□ -0.24
COL17A1-201ENST00000353479 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 ZNF425Q6IV72 752 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 PAQR6Q6TCH4 344 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 SLC22A20A6NK97 555 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 AGAP14A8MT82 685 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 D6RAR5 112 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 TNFRSF10AO00220 468 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 LAP3P28838 519 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 C7orf50Q9BRJ6 194 aaKnown RBP13.54□□□□□ -0.24
COL17A1-201ENST00000353479 LIN7BQ9HAP6 207 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 STEAP1Q9UHE8 339 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 IGHV4-34P06331 123 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 WIPI1Q5MNZ9 446 aaPredicted RBP13.54□□□□□ -0.24
COL17A1-201ENST00000353479 Q6ZTK2 550 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 LACC1Q8IV20 430 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 OR4C3Q8NH37 302 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 OR51E1Q8TCB6 317 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 CD300LFQ8TDQ1 290 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 CGGBP1Q9UFW8 167 aaPredicted RBP13.54□□□□□ -0.24
COL17A1-201ENST00000353479 UBQLN2Q9UHD9 624 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 BOLA2-SMG1P6H3BVE0 249 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 MAGEB4O15481 346 aaPredicted RBP13.54□□□□□ -0.24
COL17A1-201ENST00000353479 TBX19O60806 448 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 TAS2R46P59540 309 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 ZIC1Q15915 447 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 SPAG16Q8N0X2 631 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 BATF2Q8N1L9 274 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 S1PR5Q9H228 398 aa13.54□□□□□ -0.24
COL17A1-201ENST00000353479 TMEM165Q9HC07 324 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms