RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FBXO8Q9NRD0 319 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 CHRNA9Q9UGM1 479 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 A0A0B4J203 849 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 IGHEP01854 428 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 TMEM196Q5HYL7 178 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 OR10K1Q8NGX5 313 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 FRZBQ92765 325 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 HAS2Q92819 552 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 SGK3Q96BR1 496 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 NIPAL2Q9H841 368 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 OR2W5A6NFC9 320 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 M6PRP20645 277 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 SDHAP31040 664 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 ARPC5LQ9BPX5 153 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 LUZP4Q9P127 313 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 PADI1Q9ULC6 663 aa14.65□□□□□ -0.06
PTPN11-201ENST00000351677 NSA2O95478 260 aaKnown RBP14.64□□□□□ -0.07
PTPN11-201ENST00000351677 SOD1P00441 154 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 ACSM1Q08AH1 577 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 ZNF169Q14929 603 aaPredicted RBP14.64□□□□□ -0.07
PTPN11-201ENST00000351677 MALSU1Q96EH3 234 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 ARL5BQ96KC2 179 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 OCSTAMPQ9BR26 566 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 ISG20L2Q9H9L3 353 aaKnown RBP14.64□□□□□ -0.07
PTPN11-201ENST00000351677 TMEM221A6NGB7 291 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 NRG2O14511 850 aaPredicted RBP14.64□□□□□ -0.07
PTPN11-201ENST00000351677 GPR137BO60478 399 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 MT-CO2P00403 227 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 HSF1Q00613 529 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 ACKR1Q16570 336 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 FCRL6Q6DN72 434 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 FAM71CQ8NEG0 241 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 TEX101Q9BY14 249 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 RAB9BQ9NP90 201 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 NME2P22392 152 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 CPT2P23786 658 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 DDOSTP39656 456 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 RPP30P78346 268 aaKnown RBP14.64□□□□□ -0.07
PTPN11-201ENST00000351677 TMEM100Q9NV29 134 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 SNAPINO95295 136 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 SERPINA7P05543 415 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 C8orf44Q96CB5 159 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 KNL1Q8NG31 2342 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 SULT1B1O43704 296 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 ZNF728P0DKX0 622 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 RPL18Q07020 188 aaKnown RBP14.64□□□□□ -0.07
PTPN11-201ENST00000351677 HNF4GQ14541 408 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 KCNE3Q9Y6H6 103 aa14.64□□□□□ -0.07
PTPN11-201ENST00000351677 IDSB3KWA1 339 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 CCSO14618 274 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 APOBEC1P41238 236 aaKnown RBP14.63□□□□□ -0.07
PTPN11-201ENST00000351677 OGFOD3Q6PK18 319 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 ZNF610Q8N9Z0 462 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 GJC3Q8NFK1 279 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 CNTNAP3Q9BZ76 1288 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 MSTNO14793 375 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 MZT1Q08AG7 82 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 CALHM3Q86XJ0 350 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 SLC25A19Q9HC21 320 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 LOC107986453A0A1B0GWG9 222 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 LILRB5O75023 590 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 NXPH3O95157 252 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 DIO1P49895 249 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 ASAH1Q13510 395 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 C12orf49Q9H741 205 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 DOCK1Q14185 1865 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 A0A0A6YYD5 115 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 TIMM8AO60220 97 aaPredicted RBP14.63□□□□□ -0.07
PTPN11-201ENST00000351677 TUSC2O75896 110 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 GFERP55789 205 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 NKX6-1P78426 367 aaPredicted RBP14.63□□□□□ -0.07
PTPN11-201ENST00000351677 LINC00299Q6ZSB3 139 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 LIMS2Q7Z4I7 341 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 KIAA0907Q7Z7F0 614 aaPredicted RBP14.63□□□□□ -0.07
PTPN11-201ENST00000351677 RNF170Q96K19 258 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 TMEM43Q9BTV4 400 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 OR51B4Q9Y5P0 310 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 A0A1W2PNR3 127 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 MSL3P1P0C860 447 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 YBX1P67809 324 aaKnown RBP14.63□□□□□ -0.07
PTPN11-201ENST00000351677 LANCL3Q6ZV70 420 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 TWSG1Q9GZX9 223 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 SLCO5A1Q9H2Y9 848 aa14.63□□□□□ -0.07
PTPN11-201ENST00000351677 GABARAPH6UMI1 98 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 PTBP1P26599 531 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN11-201ENST00000351677 S100A11P31949 105 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 RAE1P78406 368 aaKnown RBP14.62□□□□□ -0.07
PTPN11-201ENST00000351677 PRSS36Q5K4E3 855 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 SIRT6Q8N6T7 355 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 CHST11Q9NPF2 352 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 ZNF814B7Z6K7 855 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 ZNF587BE7ETH6 402 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 EIF4EP06730 217 aaKnown RBP14.62□□□□□ -0.07
PTPN11-201ENST00000351677 PPT1P50897 306 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 GRB2P62993 217 aaKnown RBP14.62□□□□□ -0.07
PTPN11-201ENST00000351677 PHLDA2Q53GA4 152 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 CD276Q5ZPR3 534 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 HAO2Q9NYQ3 351 aa14.62□□□□□ -0.07
PTPN11-201ENST00000351677 A0A1W2PPV4 95 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms