RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ATPAF1Q5TC12 328 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-202ENST00000348987 PARM1Q6UWI2 310 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF227Q86WZ6 799 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 INO80EQ8NBZ0 244 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-202ENST00000348987 OR10R2Q8NGX6 335 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 OR5AK2Q8NH90 309 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 ARL5BQ96KC2 179 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 MYADMQ96S97 322 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 PCOLCE2Q9UKZ9 415 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF346Q9UL40 294 aaKnown RBP16.91■□□□□ 0.3
SCARF1-202ENST00000348987 MRPS2Q9Y399 296 aaKnown RBP16.91■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3KA0A087X1G2 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3FA6NER0 549 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-202ENST00000348987 MCIDASD6RGH6 385 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 RAB3DO95716 219 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 IGHV2-70P01814 119 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 HLA-AP01891 365 aaKnown RBP16.9■□□□□ 0.3
SCARF1-202ENST00000348987 THBS1P07996 1170 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF44P15621 663 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 SPI1P17947 270 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 CSRP1P21291 193 aaKnown RBP16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3GQ6DHY5 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 GALNT16Q8N428 558 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 CDV3Q9UKY7 258 aaKnown RBP16.9■□□□□ 0.3
SCARF1-202ENST00000348987 SLC22A7Q9Y694 548 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3DA0A087WVF3 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3IA0A087WXS9 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3LB9A6J9 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 WNT11O96014 354 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 AMY2AP04746 511 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3HP0C7X1 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 S100PP25815 95 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 ABCD3P28288 659 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 GDI1P31150 447 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3CQ6IPX1 549 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D3Q8IZP1 549 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-202ENST00000348987 EDAQ92838 391 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 PTCHD1Q96NR3 888 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 GAL3ST1Q99999 423 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 FRRS1LQ9P0K9 344 aa16.9■□□□□ 0.3
SCARF1-202ENST00000348987 A0A1W2PPE3 182 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 FBXO45P0C2W1 286 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 NID1P14543 1247 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 COL19A1Q14993 1142 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 SCGB2B2Q4G0G5 96 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM31Q5JXX7 168 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 ETV3LQ6ZN32 361 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 OR51A4Q8NGJ6 313 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 OR10AC1Q8NH08 325 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 TMED6Q8WW62 240 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 GAL3ST3Q96A11 431 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 ZBTB8AQ96BR9 441 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF285Q96NJ3 590 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 SEBOXQ9HB31 216 aaPredicted RBP16.89■□□□□ 0.29
SCARF1-202ENST00000348987 PRSS38A1L453 326 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 C1orf196B1AJZ1 125 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 TXNL1O43396 289 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 ALOX12BO75342 701 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 HTR3BO95264 441 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 ADH1BP00325 375 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 RD3LP0DJH9 198 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 PGAM2P15259 253 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 POU3F4P49335 361 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 PRKXP51817 358 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 PLAURQ03405 335 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 FABP9Q0Z7S8 132 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 GXYLT1Q4G148 440 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM151BQ8IW70 566 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF619Q8N2I2 560 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM52Q8NDY8 209 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 OR1E3Q8WZA6 343 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 TSACCQ96A04 125 aaPredicted RBP16.89■□□□□ 0.29
SCARF1-202ENST00000348987 PIK3IP1Q96FE7 263 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 POTEKPQ9BYX7 375 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 SELENOIQ9C0D9 397 aa16.89■□□□□ 0.29
SCARF1-202ENST00000348987 FARSAQ9Y285 508 aaKnown RBP16.89■□□□□ 0.29
SCARF1-202ENST00000348987 PMS2P1A4D2B8 440 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 DBIP07108 87 aaKnown RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 SDHAP31040 664 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 AQP2P41181 271 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 TSFMP43897 325 aaKnown RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 SRSF4Q08170 494 aaKnown RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ENPP2Q13822 863 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 NKAPLQ5M9Q1 402 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 PRAMEF17Q5VTA0 474 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 FIGNL1Q6PIW4 674 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 RNF141Q8WVD5 230 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 C14orf79Q96F83 325 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 PRMT8Q9NR22 394 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 FLRT3Q9NZU0 649 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 RPH3AQ9Y2J0 694 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ARHGEF17Q96PE2 2063 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 GATCO43716 136 aaKnown RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 CSN2P05814 226 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 FOLR2P14207 255 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 RPL4P36578 427 aaKnown RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ADPRHP54922 357 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ARHGAP40Q5TG30 622 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ZAR1Q86SH2 424 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF511Q8NB15 262 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms